RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 CD40LGP29965 261 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 PITPNAQ00169 270 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 TSPAN14Q8NG11 270 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 DDB2Q92466 427 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 GPHA2Q96T91 129 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 ANXA10Q9UJ72 324 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 SPATA2Q9UM82 520 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 OR2W1Q9Y3N9 320 aa8.23□□□□□ -1.09
COL6A3-214ENST00000493608 COL7A1Q02388 2944 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 A0A087WXM4 84 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 ANKRD34BA5PLL1 514 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 MSGN1A6NI15 193 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 OVOL1O14753 267 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 AIREO43918 545 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 LY86O95711 162 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 IGLV2-14P01704 120 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 LGALS1P09382 135 aaKnown RBP8.22□□□□□ -1.09
COL6A3-214ENST00000493608 RRASP10301 218 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 RPS19P39019 145 aaKnown RBP8.22□□□□□ -1.09
COL6A3-214ENST00000493608 ARPC4P59998 168 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 CD69Q07108 199 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 TNXAQ16473 311 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 PYHIN1Q6K0P9 492 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 C11orf87Q6NUJ2 197 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 BEST4Q8NFU0 473 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 YIPF6Q96EC8 236 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 ADTRPQ96IZ2 230 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 RHOVQ96L33 236 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 PHB2Q99623 299 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 RBMX2Q9Y388 322 aaKnown RBP8.22□□□□□ -1.09
COL6A3-214ENST00000493608 ETV7Q9Y603 341 aa8.22□□□□□ -1.09
COL6A3-214ENST00000493608 TNFSF12O43508 249 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 RAMP3O60896 148 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 SAP30O75446 220 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 TNFAIP8O95379 198 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 HSPB1P04792 205 aaKnown RBP8.21□□□□□ -1.1
COL6A3-214ENST00000493608 AADACP22760 399 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 FCGR2CP31995 323 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 UBE2KP61086 200 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 PRSS8Q16651 343 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 VMA21Q3ZAQ7 101 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 KCTD9Q7L273 389 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 HOGA1Q86XE5 327 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 VKORC1L1Q8N0U8 176 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 TEX45Q8NA69 505 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 POC5Q8NA72 575 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 SECTM1Q8WVN6 248 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 TCTEX1D2Q8WW35 142 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 ACOT12Q8WYK0 555 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 SLA2Q9H6Q3 261 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 AUNIPQ9H7T9 357 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF430Q9H8G1 570 aaPredicted RBP8.21□□□□□ -1.1
COL6A3-214ENST00000493608 DIABLOQ9NR28 239 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 CCL28Q9NRJ3 127 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 COA4Q9NYJ1 87 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 TAS2R8Q9NYW2 309 aa8.21□□□□□ -1.1
COL6A3-214ENST00000493608 ZMAT5Q9UDW3 170 aaKnown RBP8.21□□□□□ -1.1
COL6A3-214ENST00000493608 C13orf42A0A1B0GVH6 325 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 SAA1P0DJI8 122 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-214ENST00000493608 SCAND1P57086 179 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 BRWD1-AS2P59051 145 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 TIMM50Q3ZCQ8 353 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 HAPLN4Q86UW8 402 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 MFSD4AQ8N468 514 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 OSR1Q8TAX0 266 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-214ENST00000493608 VCX3AQ9NNX9 186 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF256Q9Y2P7 627 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-214ENST00000493608 PRELID3BQ9Y3B1 194 aa8.2□□□□□ -1.1
COL6A3-214ENST00000493608 LSM4Q9Y4Z0 139 aaKnown RBP8.2□□□□□ -1.1
COL6A3-214ENST00000493608 MPPED1O15442 326 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 XRCC3O43542 346 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 RBMXL2O75526 392 aaKnown RBP8.19□□□□□ -1.1
COL6A3-214ENST00000493608 SLC22A5O76082 557 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 PRH1P02810 166 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 FXYD4P59646 89 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 NCS1P62166 190 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-214ENST00000493608 C10orf55Q5SWW7 151 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 ACSM6Q6P461 480 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 SSX9Q7RTT3 188 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 ZNF429Q86V71 674 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 SAMD12Q8N8I0 201 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 SRSF12Q8WXF0 261 aaKnown RBP8.19□□□□□ -1.1
COL6A3-214ENST00000493608 SNAPC3Q92966 411 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 S100A16Q96FQ6 103 aaKnown RBP8.19□□□□□ -1.1
COL6A3-214ENST00000493608 ASCL2Q99929 193 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 B9D2Q9BPU9 175 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 TINAGL1Q9GZM7 467 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-214ENST00000493608 ADAM30Q9UKF2 790 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 DNAH9Q9NYC9 4486 aa8.19□□□□□ -1.1
COL6A3-214ENST00000493608 A0A0A6YYH2 397 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 A0A0G2JLM5 398 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 HMX3A6NHT5 357 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 A6NJ64 397 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 H3BUA1 57 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 PPYP01298 95 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 TRBV12-3P01733 135 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 SPNP16150 400 aa8.18□□□□□ -1.1
COL6A3-214ENST00000493608 INSL3P51460 131 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms