RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 HOXA6P31267 233 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 SP5Q6BEB4 398 aaPredicted RBP13.03□□□□□ -0.32
CACUL1-206ENST00000493518 MS4A10Q96PG2 267 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 RBFOX2O43251 390 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACUL1-206ENST00000493518 CNN1P51911 297 aaKnown RBP13.03□□□□□ -0.32
CACUL1-206ENST00000493518 BRWD1-AS2P59051 145 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 OR5I1Q13606 314 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 SPATA31B1PQ5VZV4 182 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 R3HDM4Q96D70 268 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 PRB4P10163 310 aaPredicted RBP13.03□□□□□ -0.32
CACUL1-206ENST00000493518 GATA2P23769 480 aaPredicted RBP13.03□□□□□ -0.32
CACUL1-206ENST00000493518 KCNIP4Q6PIL6 250 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 ZNF645Q8N7E2 425 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 KLF14Q8TD94 323 aaPredicted RBP13.03□□□□□ -0.32
CACUL1-206ENST00000493518 TMEM45BQ96B21 275 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 FKBP11Q9NYL4 201 aa13.03□□□□□ -0.32
CACUL1-206ENST00000493518 ZFHX2Q9C0A1 2572 aaPredicted RBP13.03□□□□□ -0.32
CACUL1-206ENST00000493518 MDFIC2A0A1B0GVS7 189 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 A8MWP6 167 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 SMPD2O60906 423 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 KITLGP21583 273 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 CD1BP29016 333 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 GPR12P47775 334 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 ZNF90Q03938 601 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 OR4A16Q8NH70 328 aa13.02□□□□□ -0.32
CACUL1-206ENST00000493518 RNF212BA8MTL3 300 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 F6UZH7 168 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 IGHV3-48P01763 117 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 CD82P27701 267 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 HES3Q5TGS1 186 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 ZNRF1Q8ND25 227 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 TBX15Q96SF7 602 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 OR6C3Q9NZP0 311 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 WNK2Q9Y3S1 2297 aa13.02□□□□□ -0.33
CACUL1-206ENST00000493518 IGKV3D-15A0A087WSY6 115 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.01□□□□□ -0.33
CACUL1-206ENST00000493518 MRPL49Q13405 166 aaKnown RBP13.01□□□□□ -0.33
CACUL1-206ENST00000493518 NANOS1Q8WY41 292 aaKnown RBP13.01□□□□□ -0.33
CACUL1-206ENST00000493518 COQ2Q96H96 371 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 MANBALQ9NQG1 85 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 F2Z2F3 143 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 HOXC12P31275 282 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 TMEM164Q5U3C3 297 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 OR2Z1Q8NG97 314 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 SPRR3Q9UBC9 169 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 HSPB7Q9UBY9 170 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 SPTBN1Q01082 2364 aaKnown RBP13.01□□□□□ -0.33
CACUL1-206ENST00000493518 AKAP6Q13023 2319 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 SRSF6Q13247 344 aaKnown RBP13.01□□□□□ -0.33
CACUL1-206ENST00000493518 FXYD3Q14802 87 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 ACOT6Q3I5F7 207 aaPredicted RBP13.01□□□□□ -0.33
CACUL1-206ENST00000493518 LINC01551Q86U37 167 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 NHLRC2Q8NBF2 726 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 BCL2L2Q92843 193 aaPredicted RBP13.01□□□□□ -0.33
CACUL1-206ENST00000493518 STRADBQ9C0K7 418 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 TECTAO75443 2155 aa13.01□□□□□ -0.33
CACUL1-206ENST00000493518 NAV3Q8IVL0 2385 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 TRGV5A0A0B4J1U4 118 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 MLNRO43193 412 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 FOXH1O75593 365 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 MOB3BQ86TA1 216 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 BAGE3Q86Y29 109 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 BAGE2Q86Y30 109 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 SAMD10Q9BYL1 202 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 LINC00470Q9BZP3 86 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
CACUL1-206ENST00000493518 IER3P46695 156 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 TAS2R60P59551 318 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 TRA2AQ13595 282 aaKnown RBP eCLIP13□□□□□ -0.33
CACUL1-206ENST00000493518 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 TMEM242Q9NWH2 141 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 TRBV20OR9-2A0A075B6H5 130 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 IGHEP01854 428 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 SP1P08047 785 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 ADMP35318 185 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 GNG10P50151 68 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 CCL11P51671 97 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 HLA-DRB5Q30154 266 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 LRRC29Q8WV35 223 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 PKIBQ9C010 78 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 ZNRD1Q9P1U0 126 aa13□□□□□ -0.33
CACUL1-206ENST00000493518 B4E171 279 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 C17orf112F2Z3M2 114 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 OR10J4P0C629 311 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 IGHV1-2P23083 117 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 TSPAN7P41732 249 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 FOXF2Q12947 444 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 OCC1Q8TAD7 63 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 FAM216AQ8WUB2 273 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 TMEM170AQ8WVE7 144 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 MS4A5Q9H3V2 200 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 RYDENQ9NUL5 291 aaKnown RBP12.99□□□□□ -0.33
CACUL1-206ENST00000493518 TANC2Q9HCD6 1990 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 SPTAN1Q13813 2472 aaKnown RBP12.99□□□□□ -0.33
CACUL1-206ENST00000493518 TNFSF15O95150 251 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 CLDN14O95500 239 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 ZNF25P17030 456 aaPredicted RBP12.99□□□□□ -0.33
CACUL1-206ENST00000493518 LHFPL4Q7Z7J7 247 aa12.99□□□□□ -0.33
CACUL1-206ENST00000493518 OR4P4Q8NGL7 312 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms