RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 TMEM272A0A1B0GTI8 110 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 CYB5BO43169 146 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 PROP1O75360 226 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 CRYGBP07316 175 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 DTYMKP23919 212 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 DUTP33316 252 aaKnown RBP8.82□□□□□ -1
COL6A3-213ENST00000493475 HSPA13P48723 471 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 PJVKQ0ZLH3 352 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 DYRK1AQ13627 763 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 IRF3Q14653 427 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 CDK10Q15131 360 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 ANKRD55Q3KP44 614 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 TMEM91Q6ZNR0 172 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 Q6ZS49 121 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 KCTD9Q7L273 389 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 ZNF645Q8N7E2 425 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 ADAD2Q8NCV1 583 aaKnown RBP8.82□□□□□ -1
COL6A3-213ENST00000493475 CYYR1Q96J86 154 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
COL6A3-213ENST00000493475 IFITM5A6NNB3 132 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 FCGR3BO75015 233 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 GGCTO75223 188 aaKnown RBP8.81□□□□□ -1
COL6A3-213ENST00000493475 CSN3P07498 182 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 APELAP0DMC3 54 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 GNB3P16520 340 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 RAB3BP20337 219 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 LINC00205P59089 165 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 FABP5Q01469 135 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 GUCA2BQ16661 112 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 OR4A47Q6IF82 309 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 ZNF367Q7RTV3 350 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 OR4S2Q8NH73 311 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 HSD17B10Q99714 261 aaKnown RBP8.81□□□□□ -1
COL6A3-213ENST00000493475 NEURL2Q9BR09 285 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 ATG5Q9H1Y0 275 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 DCSTAMPQ9H295 470 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 DUSP21Q9H596 190 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 AKIP1Q9NQ31 210 aa8.81□□□□□ -1
COL6A3-213ENST00000493475 NKX1-2Q9UD57 310 aaPredicted RBP8.81□□□□□ -1
COL6A3-213ENST00000493475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.8□□□□□ -1
COL6A3-213ENST00000493475 MFNGO00587 321 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 HRASP01112 189 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 SAA1P0DJI8 122 aaPredicted RBP8.8□□□□□ -1
COL6A3-213ENST00000493475 HIST1H1BP16401 226 aaKnown RBP8.8□□□□□ -1
COL6A3-213ENST00000493475 GALP22466 123 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 MAS1LP35410 378 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 TBCEQ15813 527 aaPredicted RBP8.8□□□□□ -1
COL6A3-213ENST00000493475 C15orf32Q32M92 178 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 IDO2Q6ZQW0 420 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 H1FOOQ8IZA3 346 aaPredicted RBP8.8□□□□□ -1
COL6A3-213ENST00000493475 TTC9CQ8N5M4 171 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 GFI1Q99684 422 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 ZNF430Q9H8G1 570 aaPredicted RBP8.8□□□□□ -1
COL6A3-213ENST00000493475 PLEKHA3Q9HB20 300 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 ZNF230Q9UIE0 474 aaPredicted RBP8.8□□□□□ -1
COL6A3-213ENST00000493475 OR2W1Q9Y3N9 320 aa8.8□□□□□ -1
COL6A3-213ENST00000493475 TENM2Q9NT68 2774 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 SRRM4A7MD48 611 aaKnown RBP8.79□□□□□ -1
COL6A3-213ENST00000493475 DEFA4P12838 97 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 KIR2DS2P43631 304 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 GNG2P59768 71 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 ARPC4P59998 168 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 CD300EQ496F6 205 aaPredicted RBP8.79□□□□□ -1
COL6A3-213ENST00000493475 IL34Q6ZMJ4 242 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 DDB2Q92466 427 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 EEF1AKMT3Q96AZ1 226 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 OR2A7Q96R45 310 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 ST6GALNAC5Q9BVH7 336 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 OR51E2Q9H255 320 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 THYN1Q9P016 225 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 KCNK7Q9Y2U2 307 aa8.79□□□□□ -1
COL6A3-213ENST00000493475 TRBV9A0A0B4J1U6 114 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 NPIPB5A8MRT5 1133 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 OR11H12B2RN74 326 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 LGALS9O00182 355 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 RAB27BO00194 218 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 BMPR1BO00238 502 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 OR2J3O76001 311 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 TRBV12-3P01733 135 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 CRHBPP24387 322 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 RPL27AP46776 148 aaKnown RBP8.78□□□□□ -1
COL6A3-213ENST00000493475 AQP4P55087 323 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 SSBP2P81877 361 aaPredicted RBP8.78□□□□□ -1
COL6A3-213ENST00000493475 DEFA5Q01523 94 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 HACD4Q5VWC8 232 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 CNIH2Q6PI25 160 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 TCTEX1D2Q8WW35 142 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 MAFIPQ8WZ33 124 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 BORCS5Q969J3 196 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 CXorf58Q96LI9 332 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 FYTTD1Q96QD9 318 aaKnown RBP8.78□□□□□ -1
COL6A3-213ENST00000493475 SRD5A3Q9H8P0 318 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 NDUFB11Q9NX14 153 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 FBXL7Q9UJT9 491 aa8.78□□□□□ -1
COL6A3-213ENST00000493475 RBMX2Q9Y388 322 aaKnown RBP8.78□□□□□ -1
COL6A3-213ENST00000493475 TRDV1A0A1B0GX56 115 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 ZNF320A2RRD8 509 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 LINC00473A8K010 186 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms