RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 SNAPC3Q92966 411 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 TINAGL1Q9GZM7 467 aaPredicted RBP10.52□□□□□ -0.73
IRF1-210ENST00000493208 PEMTQ9UBM1 199 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 SCOCQ9UIL1 159 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 A0A087WW49 117 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 MSGN1A6NI15 193 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 H0Y980 276 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 OR2A4O95047 310 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 CRYGBP07316 175 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 SLURP1P55000 103 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 HERV-K104P61576 105 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 RPEL1Q2QD12 228 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 UBE2NLQ5JXB2 153 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 HOGA1Q86XE5 327 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 TSPAN14Q8NG11 270 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 OR4A5Q8NH83 315 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 SRSF12Q8WXF0 261 aaKnown RBP10.51□□□□□ -0.73
IRF1-210ENST00000493208 DDB2Q92466 427 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 DLX4Q92988 240 aaPredicted RBP10.51□□□□□ -0.73
IRF1-210ENST00000493208 KCTD12Q96CX2 325 aaKnown RBP10.51□□□□□ -0.73
IRF1-210ENST00000493208 WWC2-AS2Q96NR7 200 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 OR2A7Q96R45 310 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 PRR25Q96S07 402 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 RSRP1Q9BUV0 290 aa10.51□□□□□ -0.73
IRF1-210ENST00000493208 PEF1Q9UBV8 284 aaKnown RBP10.51□□□□□ -0.73
IRF1-210ENST00000493208 J3QRK9 145 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 FCGR2CP31995 323 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 TAS2R46P59540 309 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 ATP5G2Q06055 141 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 TMEM69Q5SWH9 247 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 OR13F1Q8NGS4 319 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 CASTOR1Q8WTX7 329 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 RBMXL1Q96E39 390 aaKnown RBP10.5□□□□□ -0.73
IRF1-210ENST00000493208 TPSG1Q9NRR2 321 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 ZNF257Q9Y2Q1 563 aa10.5□□□□□ -0.73
IRF1-210ENST00000493208 LINC00473A8K010 186 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 XRCC3O43542 346 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 SAA1P0DJI8 122 aaPredicted RBP10.49□□□□□ -0.73
IRF1-210ENST00000493208 GP9P14770 177 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 HIST1H1BP16401 226 aaKnown RBP10.49□□□□□ -0.73
IRF1-210ENST00000493208 LINC00205P59089 165 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 ERVK-16P61578 105 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 SGPP2Q8IWX5 399 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 CMTM1Q8IZ96 169 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 MFSD4AQ8N468 514 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 NECAP1Q8NC96 275 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 OR5AP2Q8NGF4 316 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 SECTM1Q8WVN6 248 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 ALX4Q9H161 411 aaPredicted RBP10.49□□□□□ -0.73
IRF1-210ENST00000493208 AUNIPQ9H7T9 357 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 ZNF430Q9H8G1 570 aaPredicted RBP10.49□□□□□ -0.73
IRF1-210ENST00000493208 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 LSM4Q9Y4Z0 139 aaKnown RBP10.49□□□□□ -0.73
IRF1-210ENST00000493208 U3KQK5 164 aa10.49□□□□□ -0.73
IRF1-210ENST00000493208 IGKV1D-8A0A087WSZ0 117 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 RBFOX2O43251 390 aaKnown RBP eCLIP10.48□□□□□ -0.73
IRF1-210ENST00000493208 KBTBD11O94819 623 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 PPYP01298 95 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 DEFA4P12838 97 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 PJVKQ0ZLH3 352 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 ASPHD1Q5U4P2 390 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 THOC7Q6I9Y2 204 aaKnown RBP10.48□□□□□ -0.73
IRF1-210ENST00000493208 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 IDO2Q6ZQW0 420 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 AP3S1Q92572 193 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 CMTM3Q96MX0 182 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 SLC5A7Q9GZV3 580 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 ZMAT4Q9H898 229 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 THYN1Q9P016 225 aa10.48□□□□□ -0.73
IRF1-210ENST00000493208 ELF5Q9UKW6 265 aaPredicted RBP10.48□□□□□ -0.73
IRF1-210ENST00000493208 ANKRD34BA5PLL1 514 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 SRRM4A7MD48 611 aaKnown RBP10.47□□□□□ -0.73
IRF1-210ENST00000493208 HPRT1P00492 218 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 FGF2P09038 288 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 RPL27AP46776 148 aaKnown RBP10.47□□□□□ -0.73
IRF1-210ENST00000493208 TAS2R31P59538 309 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 RPL8P62917 257 aaKnown RBP10.47□□□□□ -0.73
IRF1-210ENST00000493208 RHOGP84095 191 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 OR2B11Q5JQS5 317 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 LPCAT3Q6P1A2 487 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 HSD17B13Q7Z5P4 300 aaPredicted RBP10.47□□□□□ -0.73
IRF1-210ENST00000493208 SPAG16Q8N0X2 631 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 TTC9CQ8N5M4 171 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 SAMD12Q8N8I0 201 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 ADAD2Q8NCV1 583 aaKnown RBP10.47□□□□□ -0.73
IRF1-210ENST00000493208 OR5H2Q8NGV7 314 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 TMEM167AQ8TBQ9 72 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 GIMAP1Q8WWP7 306 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 SLC25A38Q96DW6 304 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 COMMD5Q9GZQ3 224 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 HRASLSQ9HDD0 168 aa10.47□□□□□ -0.73
IRF1-210ENST00000493208 SSX5O60225 188 aa10.46□□□□□ -0.73
IRF1-210ENST00000493208 CLEC2LP0C7M8 214 aa10.46□□□□□ -0.73
IRF1-210ENST00000493208 NQO2P16083 231 aa10.46□□□□□ -0.73
IRF1-210ENST00000493208 PRSS3P35030 304 aa10.46□□□□□ -0.73
IRF1-210ENST00000493208 FXYD4P59646 89 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms