RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TNFAIP6P98066 277 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-220ENST00000492280 HEPN1Q6WQI6 88 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 TCF23Q7RTU1 214 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 OR10G4Q8NGN3 311 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 OR10G9Q8NGN4 311 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 OR10G7Q8NGN6 311 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 ABHD17AQ96GS6 310 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 PSMG3Q9BT73 122 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-220ENST00000492280 OR6C3Q9NZP0 311 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 SAA2-SAA4A0A096LPE2 208 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-220ENST00000492280 GLRXP35754 106 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 PRB3Q04118 309 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-220ENST00000492280 ADIRFQ15847 76 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 C17orf58Q2M2W7 97 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 WDR25Q64LD2 544 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-220ENST00000492280 LYG1Q8N1E2 194 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 ZBTB34Q8NCN2 500 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 TP53TG5Q9Y2B4 290 aa10.28□□□□□ -0.76
HMGN1-220ENST00000492280 FAM90A26D6RGX4 464 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 RAB29O14966 203 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 MEOX2P50222 304 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 CT45A1Q5HYN5 189 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 ZNF561Q8N587 486 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 CT45A3Q8NHU0 189 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 RND1Q92730 232 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 RAB24Q969Q5 203 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 SNX22Q96L94 193 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 HSD17B10Q99714 261 aaKnown RBP10.27□□□□□ -0.76
HMGN1-220ENST00000492280 TMEM140Q9NV12 185 aa10.27□□□□□ -0.76
HMGN1-220ENST00000492280 MAP1AP78559 2803 aaPredicted RBP10.27□□□□□ -0.76
HMGN1-220ENST00000492280 ADH4P08319 380 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 PAX6P26367 422 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 OR51G1Q8NGK1 321 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 TMEM170AQ8WVE7 144 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 HEYLQ9NQ87 328 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-220ENST00000492280 CISD1Q9NZ45 108 aaKnown RBP10.27□□□□□ -0.77
HMGN1-220ENST00000492280 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 CD40P25942 277 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 EIF2S3P41091 472 aaKnown RBP10.27□□□□□ -0.77
HMGN1-220ENST00000492280 SERF2P84101 59 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 HTD2P86397 168 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 RNF212Q495C1 297 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 IGF2-ASQ6U949 168 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 ZNF66Q6ZN08 573 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 OR4F5Q8NH21 305 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 OR4A16Q8NH70 328 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 SSMEM1Q8WWF3 244 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 EDARADDQ8WWZ3 215 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 OR4F4Q96R69 305 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 SMIM7Q9BQ49 75 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 TUBA4BQ9H853 241 aa10.27□□□□□ -0.77
HMGN1-220ENST00000492280 MALRD1Q5VYJ5 2156 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 A0A0G2JNJ9 132 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 TMPRSS2O15393 492 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 TRGC2P03986 189 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 DPPA3Q6W0C5 159 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 UNKLQ9H9P5 680 aaKnown RBP10.26□□□□□ -0.77
HMGN1-220ENST00000492280 Q9UFV3 132 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 PGPEP1LA6NFU8 196 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 PAGE4O60829 102 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 RD3LP0DJH9 198 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 NDUFB7P17568 137 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 REG1BP48304 166 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 DLX1P56177 255 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 IGFL3Q6UXB1 125 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 SPNS3Q6ZMD2 512 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 MOB3BQ86TA1 216 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 Q8N7P7 452 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 GAFA1Q96PS6 74 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 S1PR3Q99500 378 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 JPT1Q9UK76 154 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
HMGN1-220ENST00000492280 A8MXE2 369 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 LHBP01229 141 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 GZMHP20718 246 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 TUBG1P23258 451 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 NDUFA6P56556 154 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 MEF2BQ02080 365 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-220ENST00000492280 MIC13Q5XKP0 118 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 NEUROG1Q92886 237 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 DERL1Q9BUN8 251 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 ELOVL1Q9BW60 279 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 TOLLIPQ9H0E2 274 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 IGLV3-9A0A075B6K5 115 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 CLN5O75503 358 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 IGKV1-16P04430 117 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 CCL3L1P16619 93 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 RELBQ01201 579 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 ASCL5Q7RTU5 278 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 DOLPP1Q86YN1 238 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 ZNF383Q8NA42 475 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 RHOVQ96L33 236 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 SMDT1Q9H4I9 107 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 RNF7Q9UBF6 113 aa10.25□□□□□ -0.77
HMGN1-220ENST00000492280 VAX2Q9UIW0 290 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms