RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 RPL30P62888 115 aaKnown RBP6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 CBX3Q13185 183 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 ARFRP1Q13795 201 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 CDK10Q15131 360 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 LINC00322Q6ZN03 302 aaPredicted RBP6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 FAM223AQ8IWN6 122 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 PUSL1Q8N0Z8 303 aaKnown RBP6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 SNAPC3Q92966 411 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 ST6GALNAC5Q9BVH7 336 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 ATG5Q9H1Y0 275 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF430Q9H8G1 570 aaPredicted RBP6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF355PQ9NSJ1 428 aa6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 RBMX2Q9Y388 322 aaKnown RBP6.37□□□□□ -1.39
SMARCB1-207ENST00000491967 A0A075B6Q4 140 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 A0A1B0GW64 132 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 ANKRD34BA5PLL1 514 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 TEX22C9J3V5 150 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 H0Y980 276 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 BMPR1BO00238 502 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 AIREO43918 545 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 CRYGCP07315 174 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 IL6RP08887 468 aaPredicted RBP6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF735P0CB33 412 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 SYNJ2BPP57105 145 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 RHOGP84095 191 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 FAM209BQ5JX69 171 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 SFXN4Q6P4A7 337 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 ADAMTSL5Q6ZMM2 481 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 IDO2Q6ZQW0 420 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 ANKRD13BQ86YJ7 626 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 NECAP1Q8NC96 275 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 OR2K2Q8NGT1 345 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 TMEM167AQ8TBQ9 72 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 HSD17B10Q99714 261 aaKnown RBP6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 SPIN2AQ99865 258 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 SPIN2BQ9BPZ2 258 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 OR51E2Q9H255 320 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 EDA2RQ9HAV5 297 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 AKIP1Q9NQ31 210 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 ANXA10Q9UJ72 324 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 DYNC2H1Q8NCM8 4307 aaKnown RBP6.36□□□□□ -1.39
SMARCB1-207ENST00000491967 A0A0A6YYH2 397 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 TMEM235A6NFC5 223 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 A6NJ64 397 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 NPIPB5A8MRT5 1133 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 E7EUB6 86 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 LGALS9O00182 355 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 CREBL2O60519 120 aaPredicted RBP6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 TMEM127O75204 238 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 FGF2P09038 288 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 NFYAP23511 347 aaPredicted RBP6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 SDC2P34741 201 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 MAS1LP35410 378 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 TNXAQ16473 311 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 TATDN3Q17R31 274 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF773Q6PK81 442 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 HAPLN4Q86UW8 402 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 MMD2Q8IY49 270 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 Q8N402 240 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 NUDCD2Q8WVJ2 157 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 SLC25A38Q96DW6 304 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 ZMAT4Q9H898 229 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 SLC2A9Q9NRM0 540 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 RHBDL2Q9NX52 303 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 COA4Q9NYJ1 87 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 DAPK2Q9UIK4 370 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF257Q9Y2Q1 563 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 PRELID3BQ9Y3B1 194 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 RBM7Q9Y580 266 aaKnown RBP6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 ETV7Q9Y603 341 aa6.35□□□□□ -1.39
SMARCB1-207ENST00000491967 SMIM30A4D0T7 59 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 IZUMO1RA6ND01 250 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 CGB1A6NKQ9 187 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF785A8K8V0 405 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 RBFOX2O43251 390 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 FCGR3BO75015 233 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 KBTBD11O94819 623 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 APELAP0DMC3 54 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 CD36P16671 472 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 DEFA5Q01523 94 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 ATP5G2Q06055 141 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 POU2AF1Q16633 256 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 HAGHQ16775 308 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 RPEL1Q2QD12 228 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 C10orf55Q5SWW7 151 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 LCN12Q6JVE5 192 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 ZNF66Q6ZN08 573 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 KCTD9Q7L273 389 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 SLC25A42Q86VD7 318 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 HOGA1Q86XE5 327 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 GPHB5Q86YW7 130 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 LAX1Q8IWV1 398 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 CADM3Q8N126 398 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 MFSD4AQ8N468 514 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 ZBTB34Q8NCN2 500 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 OR5H6Q8NGV6 325 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 VSTM2AQ8TAG5 236 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 LGALS14Q8TCE9 139 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 305 ms