RNA–Protein interactions for RNA: ENST00000491460.5

CPA1-208, Transcript of carboxypeptidase A1, human

TSL 2

Gene CPA1, Length 1,063 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPA1-208	ENST00000491460	CDK10	Q15131	360 aa		10.87	□□□□□ -0.67
CPA1-208	ENST00000491460	C15orf32	Q32M92	178 aa		10.87	□□□□□ -0.67
CPA1-208	ENST00000491460	TMEM91	Q6ZNR0	172 aa		10.87	□□□□□ -0.67
CPA1-208	ENST00000491460	MMD2	Q8IY49	270 aa		10.87	□□□□□ -0.67
CPA1-208	ENST00000491460	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.87	□□□□□ -0.67
CPA1-208	ENST00000491460	RAB22A	Q9UL26	194 aa		10.87	□□□□□ -0.67
CPA1-208	ENST00000491460	KCNK7	Q9Y2U2	307 aa		10.87	□□□□□ -0.67
CPA1-208	ENST00000491460	TMEM272	A0A1B0GTI8	110 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	LINC00473	A8K010	186 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	LGALS9	O00182	355 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	OR2J3	O76001	311 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	GADD45A	P24522	165 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	CALR	P27797	417 aa	Known RBP	10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	MAP2K4	P45985	399 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	PSMD7	P51665	324 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	RPS25	P62851	125 aa	Known RBP	10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	RCN1	Q15293	331 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	LINC00476	Q8WZB0	136 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	WDR89	Q96FK6	387 aa	Predicted RBP	10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	SCN3B	Q9NY72	215 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	ZNF257	Q9Y2Q1	563 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460		V9GY05	133 aa		10.86	□□□□□ -0.67
CPA1-208	ENST00000491460	PPP5D1	E7EU14	171 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	EBAG9	O00559	213 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	HSMCR30	P0CW71	290 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	IRF3	Q14653	427 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	C10orf55	Q5SWW7	151 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	OR10R2	Q8NGX6	335 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	MAFIP	Q8WZ33	124 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	DCUN1D5	Q9BTE7	237 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	VCX	Q9H320	206 aa		10.85	□□□□□ -0.67
CPA1-208	ENST00000491460	DPPA5	A6NC42	116 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	MFNG	O00587	321 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	FCGR3B	O75015	233 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	OR2C1	O95371	312 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	HLA-A	P01891	365 aa	Known RBP	10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	HIST1H1D	P16402	221 aa	Known RBP	10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	GNB3	P16520	340 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	TALDO1	P37837	337 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	PLA2G7	Q13093	441 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	HES5	Q5TA89	166 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	ZNF57	Q68EA5	555 aa	Predicted RBP	10.84	□□□□□ -0.67
CPA1-208	ENST00000491460		Q6ZS49	121 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	GPHB5	Q86YW7	130 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	GGTLC1	Q9BX51	225 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	FBXL7	Q9UJT9	491 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	MRPS7	Q9Y2R9	242 aa	Known RBP	10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	PRELID3B	Q9Y3B1	194 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460	DMRT1	Q9Y5R6	373 aa		10.84	□□□□□ -0.67
CPA1-208	ENST00000491460		A0A075B6Q4	140 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	NPIPB5	A8MRT5	1133 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	CD36	P16671	472 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	EDN2	P20800	178 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	CBLN1	P23435	193 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	ARL3	P36405	182 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	ARFRP1	Q13795	201 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	ANKRD55	Q3KP44	614 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	FAM106A	Q4KMX7	169 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	KCTD9	Q7L273	389 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	TMEM61	Q8N0U2	210 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	ZNF645	Q8N7E2	425 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	OR52B4	Q8NGK2	314 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	VSTM2A	Q8TAG5	236 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	OVOL2	Q9BRP0	275 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	OR51E2	Q9H255	320 aa		10.83	□□□□□ -0.68
CPA1-208	ENST00000491460	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	CXorf65	A6NEN9	183 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	HMX3	A6NHT5	357 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460		A8MWP6	167 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	TEX22	C9J3V5	150 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	RAB27B	O00194	218 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	PDCD5	O14737	125 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	CASQ2	O14958	399 aa	Predicted RBP	10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	SLC22A5	O76082	557 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	LY6G6C	O95867	125 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	DHFR	P00374	187 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	RAB6A	P20340	208 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	RPL27A	P46776	148 aa	Known RBP	10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	MLLT11	Q13015	90 aa	Predicted RBP	10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	ARL6IP1	Q15041	203 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	SSX1	Q16384	188 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	OR4A47	Q6IF82	309 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	CACNG8	Q8WXS5	425 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	ST6GALNAC5	Q9BVH7	336 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	ACOT13	Q9NPJ3	140 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	TPRKB	Q9Y3C4	175 aa		10.82	□□□□□ -0.68
CPA1-208	ENST00000491460	ZNF320	A2RRD8	509 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	TMEM213	A2RRL7	107 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	METTL21EP	A6NDL7	271 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	NUPR2	A6NF83	97 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	KBTBD11	O94819	623 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	DTYMK	P23919	212 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	MAS1L	P35410	378 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	FABP5	Q01469	135 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	PMS2P11	Q13670	270 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	OR2B11	Q5JQS5	317 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	CLEC19A	Q6UXS0	136 aa		10.81	□□□□□ -0.68
CPA1-208	ENST00000491460	UXS1	Q8NBZ7	420 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms