RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 FCGR3BO75015 233 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 TPPPO94811 219 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 GABARAPO95166 117 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 DHFRP00374 187 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 APOA1P02647 267 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 NFYAP23511 347 aaPredicted RBP12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 RORCP51449 518 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 SLURP1P55000 103 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 LINC00205P59089 165 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 ACSM6Q6P461 480 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 ZBTB34Q8NCN2 500 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 OR4S2Q8NH73 311 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 TCTEX1D2Q8WW35 142 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 WWC2-AS2Q96NR7 200 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 BCL7BQ9BQE9 202 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 RSRP1Q9BUV0 290 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 ALX4Q9H161 411 aaPredicted RBP12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 SMIM31A0A1B0GVY4 71 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 SSX5O60225 188 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 BRI3O95415 125 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 HRASP01112 189 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 IGLV2-23P01705 113 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 KIR2DS2P43631 304 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 CDK10Q15131 360 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 PRSS8Q16651 343 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 TMEM69Q5SWH9 247 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 MZT2AQ6P582 158 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 ZNF66Q6ZN08 573 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 SAMD12Q8N8I0 201 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 SNAPC3Q92966 411 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 TINAGL1Q9GZM7 467 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 PEF1Q9UBV8 284 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 RBMX2Q9Y388 322 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 CMYA5Q8N3K9 4069 aa12.8□□□□□ -0.36
PDLIM2-217ENST00000491330 H0Y980 276 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 CRYGBP07316 175 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 OR9G9P0C7N8 305 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 SMIM18P0DKX4 95 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 LSM3P62310 102 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 CATR1Q13166 79 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 RPEL1Q2QD12 228 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 OVCH2Q7RTZ1 564 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 OR5AP2Q8NGF4 316 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 C15orf40Q8WUR7 153 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 TPSG1Q9NRR2 321 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 ELF5Q9UKW6 265 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 LSM4Q9Y4Z0 139 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 U3KQK5 164 aa12.79□□□□□ -0.36
PDLIM2-217ENST00000491330 IGKV1D-8A0A087WSZ0 117 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 ANKRD34BA5PLL1 514 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 MAS1LP35410 378 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 ATP5G2Q06055 141 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 PJVKQ0ZLH3 352 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 ASPHD1Q5U4P2 390 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 GPR141Q7Z602 305 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 DDB2Q92466 427 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 SCPEP1Q9HB40 452 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 PEMTQ9UBM1 199 aa12.78□□□□□ -0.36
PDLIM2-217ENST00000491330 FAM223BA6NKX1 122 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 SULT1C2O00338 296 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 OR2A4O95047 310 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 GP9P14770 177 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 PRSS3P35030 304 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 TAS2R46P59540 309 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 VBP1P61758 197 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 NCS1P62166 190 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 GIMAP1Q8WWP7 306 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 OR2A7Q96R45 310 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 ZMAT4Q9H898 229 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 ANAPC10Q9UM13 185 aa12.77□□□□□ -0.37
PDLIM2-217ENST00000491330 SRRM4A7MD48 611 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 LINC00473A8K010 186 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 CYB5BO43169 146 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 SPNP16150 400 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 ZNF182P17025 639 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 FCGR2CP31995 323 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 TGFBR1P36897 503 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 ALDH3B2P48448 385 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 TAS2R20P59543 309 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 CTF1Q16619 201 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 GPR107Q5VW38 600 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 C11orf87Q6NUJ2 197 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 SGPP2Q8IWX5 399 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 MFSD4AQ8N468 514 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 CD300LFQ8TDQ1 290 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 SECTM1Q8WVN6 248 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 ADAM30Q9UKF2 790 aa12.76□□□□□ -0.37
PDLIM2-217ENST00000491330 SAA1P0DJI8 122 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 NAT1P18440 290 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 S100GP29377 79 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 HERV-K104P61576 105 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 OR2B11Q5JQS5 317 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 ZNF343Q6P1L6 599 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 NECAP1Q8NC96 275 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 OR9G4Q8NGQ1 327 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 OR4A5Q8NH83 315 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms