RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 PI3P19957 117 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 SLC6A1P30531 599 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 LINC00205P59089 165 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 PSG5Q15238 335 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 OR2B11Q5JQS5 317 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 FOXRED2Q8IWF2 684 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 GALNT14Q96FL9 552 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 GON7Q9BXV9 100 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 MMP24Q9Y5R2 645 aa15.8■□□□□ 0.12
SHROOM3-209ENST00000490690 PEX14O75381 377 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 F2RL1P55085 397 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 POU2AF1Q16633 256 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 Q6ZSV7 163 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 PPP1R27Q86WC6 154 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 ENKURQ8TC29 256 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 RHOVQ96L33 236 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 VSIG4Q9Y279 399 aa15.79■□□□□ 0.12
SHROOM3-209ENST00000490690 TMEM89A2RUT3 159 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 SLC25A17O43808 307 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 ACTL6BO94805 426 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 OR2A4O95047 310 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 IGHG2P01859 326 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 LPAR6P43657 344 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 VDAC2P45880 294 aaPredicted RBP15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 CCR6P51684 374 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 C9orf152Q5JTZ5 239 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 SLC35E3Q7Z769 313 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 TMED4Q7Z7H5 227 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 MMD2Q8IY49 270 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 DMBX1Q8NFW5 382 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 OR2A7Q96R45 310 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 BET1LQ9NYM9 111 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 ZNF580Q9UK33 172 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 SIGLEC9Q9Y336 463 aa15.78■□□□□ 0.12
SHROOM3-209ENST00000490690 CLPSL1A2RUU4 121 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 MARCH11A6NNE9 402 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 RAMP3O60896 148 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 IGLV2-23P01705 113 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 AKR1C4P17516 323 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 UCP1P25874 307 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 MAS1LP35410 378 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 TRIM16LQ309B1 348 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 KRTAP24-1Q3LI83 254 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 IL22RA2Q969J5 263 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 R3HDM4Q96D70 268 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 GPHA2Q96T91 129 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 TMEM222Q9H0R3 208 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 FBXL15Q9H469 300 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 ZNF702PQ9H963 129 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 TBC1D24Q9ULP9 559 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 NUBP2Q9Y5Y2 271 aa15.77■□□□□ 0.12
SHROOM3-209ENST00000490690 AP4M1O00189 453 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 TCRBP04435 133 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 AMY1AP04745 511 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 SAA1P0DJI8 122 aaPredicted RBP15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 BTCP35070 178 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 BRWD1-AS2P59051 145 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 BLCAPP62952 87 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 ZNF562Q6V9R5 426 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 SLC25A42Q86VD7 318 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 RITA1Q96K30 269 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 C19orf24Q9BVV8 132 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 ALX4Q9H161 411 aaPredicted RBP15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 CACFD1Q9UGQ2 172 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 ATRQ13535 2644 aa15.76■□□□□ 0.11
SHROOM3-209ENST00000490690 KBTBD11O94819 623 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 S1PR2O95136 353 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 CNTFRP26992 372 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 COMPP49747 757 aaPredicted RBP15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 RAB25P57735 213 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 TMEM267Q0VDI3 215 aaPredicted RBP15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 FBLN7Q53RD9 439 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 FAM219AQ8IW50 185 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 TMEM167AQ8TBQ9 72 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 CHPT1Q8WUD6 406 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 RRNAD1Q96FB5 475 aaKnown RBP15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 TMEM68Q96MH6 324 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 C20orf85Q9H1P6 137 aa15.75■□□□□ 0.11
SHROOM3-209ENST00000490690 SRRM4A7MD48 611 aaKnown RBP15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 SNAPC5O75971 98 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 CNIH1O95406 144 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 CRYGBP07316 175 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 OR5AC1P0C628 307 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 VSIG10L2P0DP72 767 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 AKR1C2P52895 323 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 RELBQ01201 579 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 ZNF585BQ52M93 769 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 ZNF695Q8IW36 515 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 PUSL1Q8N0Z8 303 aaKnown RBP15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 LINC01006Q8NI28 216 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 RBPMSQ93062 196 aaKnown RBP15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 TP53RKQ96S44 253 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 OR51J1Q9H342 316 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 FKBP11Q9NYL4 201 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 RNF114Q9Y508 228 aa15.74■□□□□ 0.11
SHROOM3-209ENST00000490690 DUXBA0A1W2PPF3 345 aa15.73■□□□□ 0.11
SHROOM3-209ENST00000490690 CDS2O95674 445 aa15.73■□□□□ 0.11
SHROOM3-209ENST00000490690 IGF1P05019 195 aa15.73■□□□□ 0.11
SHROOM3-209ENST00000490690 VAMP1P23763 118 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms