RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 MEF2DQ14814 521 aa11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 BAK1Q16611 211 aa11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 FOXRED2Q8IWF2 684 aa11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 SLC38A6Q8IZM9 456 aa11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 SPAG16Q8N0X2 631 aa11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 PSMB11A5LHX3 300 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 ADARB2-AS1A8MUL3 147 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 G3V318 75 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 FBXO24O75426 580 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 KIR2DS2P43631 304 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 ZNF562Q6V9R5 426 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 CMTM1Q8IZ96 169 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 OR51S1Q8NGJ8 323 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 OR13C8Q8NGS7 320 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 CHPT1Q8WUD6 406 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 BORCS5Q969J3 196 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 PARP11Q9NR21 331 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 SLC2A9Q9NRM0 540 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 FBN3Q75N90 2809 aa11.29□□□□□ -0.6
SRGAP3-208ENST00000490348 CD83Q01151 205 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 CATR1Q13166 79 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 ZNF585BQ52M93 769 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 LPCAT3Q6P1A2 487 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 TBC1D26Q86UD7 250 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 MARCH1Q8TCQ1 289 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 DISC1C4P0D8 188 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 S1PR2O95136 353 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 PGAM2P15259 253 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 F2RP25116 425 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 PRSS8Q16651 343 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 PUSL1Q8N0Z8 303 aaKnown RBP11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 GDPD1Q8N9F7 314 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 RHOVQ96L33 236 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 ZNF430Q9H8G1 570 aaPredicted RBP11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 HRASLSQ9HDD0 168 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 AKIP1Q9NQ31 210 aa11.28□□□□□ -0.6
SRGAP3-208ENST00000490348 TET2Q6N021 2002 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 PIGPP57054 158 aa11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 RND3P61587 244 aa11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 GNB1P62873 340 aa11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 TOMM5Q8N4H5 51 aa11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 ZNF486Q96H40 463 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 RTBDNQ9BSG5 229 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 C5orf66Q9H5L9 145 aa11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 MCUBQ9NWR8 336 aa11.27□□□□□ -0.61
SRGAP3-208ENST00000490348 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 MPPED1O15442 326 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 SOX15O60248 233 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 KBTBD11O94819 623 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 HPRT1P00492 218 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 IGHG4P01861 327 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 TAS2R31P59538 309 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 ZNF45Q02386 682 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 FXYD3Q14802 87 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 SSX9Q7RTT3 188 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 CD300LFQ8TDQ1 290 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 ARPC1AQ92747 370 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 PRRT1Q99946 306 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 PLEKHA2Q9HB19 425 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 PTTG2Q9NZH5 202 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 NUBP2Q9Y5Y2 271 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
SRGAP3-208ENST00000490348 OR2A4O95047 310 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 TSPAN15O95858 294 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 HRASP01112 189 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 IL6RP08887 468 aaPredicted RBP11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 VDAC1P21796 283 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 POU2AF1Q16633 256 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 OR4A47Q6IF82 309 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 RNF152Q8N8N0 203 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 POC5Q8NA72 575 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 LFNGQ8NES3 379 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 OR2A7Q96R45 310 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 TP53RKQ96S44 253 aa11.25□□□□□ -0.61
SRGAP3-208ENST00000490348 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms