RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 MFNGO00587 321 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 CASQ2O14958 399 aaPredicted RBP11.95□□□□□ -0.5
PLOD3-216ENST00000489927 HLA-AP01891 365 aaKnown RBP11.95□□□□□ -0.5
PLOD3-216ENST00000489927 SAA1P0DJI8 122 aaPredicted RBP11.95□□□□□ -0.5
PLOD3-216ENST00000489927 FOLR2P14207 255 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 PSMA1P25786 263 aaKnown RBP11.95□□□□□ -0.5
PLOD3-216ENST00000489927 FABP5Q01469 135 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 GUCA2BQ16661 112 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 C15orf32Q32M92 178 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 NECAP1Q8NC96 275 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 OR10R2Q8NGX6 335 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
PLOD3-216ENST00000489927 SPIN2AQ99865 258 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 SPIN2BQ9BPZ2 258 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 ZC4H2Q9NQZ6 224 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 DMRT1Q9Y5R6 373 aa11.95□□□□□ -0.5
PLOD3-216ENST00000489927 C2orf70A6NJV1 201 aa11.94□□□□□ -0.5
PLOD3-216ENST00000489927 OR2J3O76001 311 aa11.94□□□□□ -0.5
PLOD3-216ENST00000489927 ACTL6BO94805 426 aa11.94□□□□□ -0.5
PLOD3-216ENST00000489927 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
PLOD3-216ENST00000489927 CDK10Q15131 360 aa11.94□□□□□ -0.5
PLOD3-216ENST00000489927 H1FOOQ8IZA3 346 aaPredicted RBP11.94□□□□□ -0.5
PLOD3-216ENST00000489927 WDR89Q96FK6 387 aaPredicted RBP11.94□□□□□ -0.5
PLOD3-216ENST00000489927 SELENOKQ9Y6D0 94 aa11.94□□□□□ -0.5
PLOD3-216ENST00000489927 IGKV1D-8A0A087WSZ0 117 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 RAB27BO00194 218 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 CREBL2O60519 120 aaPredicted RBP11.93□□□□□ -0.5
PLOD3-216ENST00000489927 OR2C1O95371 312 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 HIST1H1DP16402 221 aaKnown RBP11.93□□□□□ -0.5
PLOD3-216ENST00000489927 RANBP1P43487 201 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 PSMD7P51665 324 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 MLLT11Q13015 90 aaPredicted RBP11.93□□□□□ -0.5
PLOD3-216ENST00000489927 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 MMD2Q8IY49 270 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 DCUN1D5Q9BTE7 237 aa11.93□□□□□ -0.5
PLOD3-216ENST00000489927 TECRQ9NZ01 308 aaKnown RBP11.93□□□□□ -0.5
PLOD3-216ENST00000489927 HMX3A6NHT5 357 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 J3QRK9 145 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 LGALS9O00182 355 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 FCGR3BO75015 233 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 GGCTO75223 188 aaKnown RBP11.92□□□□□ -0.5
PLOD3-216ENST00000489927 GADD45AP24522 165 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 OR10A3P58181 314 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 Q6ZS49 121 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 CACNG8Q8WXS5 425 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 VCXQ9H320 206 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 DUSP21Q9H596 190 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 ZNF257Q9Y2Q1 563 aa11.92□□□□□ -0.5
PLOD3-216ENST00000489927 TEX22C9J3V5 150 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 RGS10O43665 173 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 CBLN1P23435 193 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 TALDO1P37837 337 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 ARFRP1Q13795 201 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 FAM209BQ5JX69 171 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 KCTD9Q7L273 389 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 SLC16A13Q7RTY0 426 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 VKORC1L1Q8N0U8 176 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 ZNF645Q8N7E2 425 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 MGLLQ99685 303 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 ACOT13Q9NPJ3 140 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 FBXL7Q9UJT9 491 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 ELF5Q9UKW6 265 aaPredicted RBP11.91□□□□□ -0.5
PLOD3-216ENST00000489927 TPRKBQ9Y3C4 175 aa11.91□□□□□ -0.5
PLOD3-216ENST00000489927 E7EUB6 86 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 RAB6AP20340 208 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 MAP2K4P45985 399 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 RPL30P62888 115 aaKnown RBP11.9□□□□□ -0.5
PLOD3-216ENST00000489927 GPHB5Q86YW7 130 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 CCDC140Q96MF4 163 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 CENPOQ9BU64 300 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 OR51E2Q9H255 320 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 S4R3C0 116 aa11.9□□□□□ -0.5
PLOD3-216ENST00000489927 FRAS1Q86XX4 4008 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 TMEM213A2RRL7 107 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 IFITM5A6NNB3 132 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 NPIPB5A8MRT5 1133 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 IGLV2-14P01704 120 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 IL6RP08887 468 aaPredicted RBP11.89□□□□□ -0.51
PLOD3-216ENST00000489927 ARL3P36405 182 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 MLXQ9UH92 298 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
PLOD3-216ENST00000489927 RBMX2Q9Y388 322 aaKnown RBP11.89□□□□□ -0.51
PLOD3-216ENST00000489927 PRELID3BQ9Y3B1 194 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 OR2W1Q9Y3N9 320 aa11.89□□□□□ -0.51
PLOD3-216ENST00000489927 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 A0A1B0GW64 132 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 ZNF320A2RRD8 509 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 DPPA5A6NC42 116 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 METTL21EPA6NDL7 271 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 ERICH4A6NGS2 130 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 PDCD5O14737 125 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms