RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 EDDM3BP56851 147 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 RPL15P61313 204 aaKnown RBP9.56□□□□□ -0.88
GGPS1-207ENST00000489692 FAM74A1Q5RGS3 127 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 UQCC3Q6UW78 93 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 ZNF695Q8IW36 515 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 STPG2Q8N412 459 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 OR10V1Q8NGI7 309 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 OR5R1Q8NH85 324 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 RNF141Q8WVD5 230 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 TOLLIPQ9H0E2 274 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 FAM234AQ9H0X4 552 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 ARV1Q9H2C2 271 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 C11orf1Q9H5F2 150 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 CCL28Q9NRJ3 127 aa9.56□□□□□ -0.88
GGPS1-207ENST00000489692 LSM5Q9Y4Y9 91 aaKnown RBP9.56□□□□□ -0.88
GGPS1-207ENST00000489692 MEX3AA1L020 520 aaKnown RBP9.55□□□□□ -0.88
GGPS1-207ENST00000489692 H3BUX3 64 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 M0QZ24 198 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 PGLYRP1O75594 196 aaPredicted RBP9.55□□□□□ -0.88
GGPS1-207ENST00000489692 JTBO76095 146 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 CCL3L1P16619 93 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 RCC1P18754 421 aaPredicted RBP9.55□□□□□ -0.88
GGPS1-207ENST00000489692 VDAC1P21796 283 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 F2RP25116 425 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 EDDM3AQ14507 147 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 LY6EQ16553 131 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 NMSQ5H8A3 153 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 TMEM200BQ69YZ2 307 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 TRAT1Q6PIZ9 186 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 ZBTB34Q8NCN2 500 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 TNFRSF14Q92956 283 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 SAT2Q96F10 170 aaPredicted RBP9.55□□□□□ -0.88
GGPS1-207ENST00000489692 ZC4H2Q9NQZ6 224 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 KCNIP1Q9NZI2 227 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 FBXL17Q9UF56 701 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 TRAPPC2LQ9UL33 140 aa9.55□□□□□ -0.88
GGPS1-207ENST00000489692 TEX46H3BTG2 121 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 HSD17B6O14756 317 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 TIMM23O14925 209 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 SCGB1D2O95969 90 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 PVALBP20472 110 aaPredicted RBP9.54□□□□□ -0.88
GGPS1-207ENST00000489692 M6PRP20645 277 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 ERVFRD-1P60508 538 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 COL10A1Q03692 680 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 GNMTQ14749 295 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 MIDNQ504T8 468 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 Q6ZSV7 163 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 UBAC2Q8NBM4 344 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 DMBX1Q8NFW5 382 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 LINC01006Q8NI28 216 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 SSX3Q99909 188 aa9.54□□□□□ -0.88
GGPS1-207ENST00000489692 BORCS7-ASMTA0A0B4J1R7 106 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 KCNAB3O43448 404 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 CRYZL1O95825 349 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 PAX6P26367 422 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 NKX2-1P43699 371 aaPredicted RBP9.53□□□□□ -0.88
GGPS1-207ENST00000489692 ZNF273Q14593 569 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 LRRC75BQ2VPJ9 315 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 RPL7L1Q6DKI1 246 aaKnown RBP9.53□□□□□ -0.88
GGPS1-207ENST00000489692 FOXRED2Q8IWF2 684 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 BEND2Q8NDZ0 799 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 OR52M1Q8NGK5 317 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 C17orf50Q8WW18 174 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 TMED6Q8WW62 240 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
GGPS1-207ENST00000489692 ARL11Q969Q4 196 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 MARC2Q969Z3 335 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 TAF9BQ9HBM6 251 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 FAM212BQ9NTI7 297 aaPredicted RBP9.53□□□□□ -0.88
GGPS1-207ENST00000489692 LIN7CQ9NUP9 197 aaKnown RBP9.53□□□□□ -0.88
GGPS1-207ENST00000489692 OR1A1Q9P1Q5 309 aa9.53□□□□□ -0.88
GGPS1-207ENST00000489692 RCL1Q9Y2P8 373 aaKnown RBP9.53□□□□□ -0.88
GGPS1-207ENST00000489692 A0A1B0GU03 582 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 K7N7A8 449 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 PSPNO60542 156 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 ARG1P05089 322 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 OR3A1P47881 315 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 SULT1A2P50226 295 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 BLOC1S1P78537 153 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 ID3Q02535 119 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 IL34Q6ZMJ4 242 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 C5orf24Q7Z6I8 188 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 OR4C13Q8NGP0 309 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 OR1S2Q8NGQ3 325 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 OR13D1Q8NGV5 346 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 SMIM8Q96KF7 97 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 LINC00052Q96N35 136 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 SLC25A31Q9H0C2 315 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 NCOR1P1Q9H4R4 102 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 TAS2R3Q9NYW6 316 aa9.52□□□□□ -0.89
GGPS1-207ENST00000489692 HSPA12AO43301 675 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 WIPF1O43516 503 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 PITX3O75364 302 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 SEC11BP0C7V7 166 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 ARSJQ5FYB0 599 aaPredicted RBP9.51□□□□□ -0.89
GGPS1-207ENST00000489692 HCP5Q6MZN7 132 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 TCTEX1D1Q8N7M0 179 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 TPRX1Q8N7U7 411 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 PPP1R35Q8TAP8 253 aa9.51□□□□□ -0.89
GGPS1-207ENST00000489692 IL1F10Q8WWZ1 152 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms