RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 RSG1Q9BU20 258 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 A0A1W2PP11 408 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 TMEM8BA6NDV4 472 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 RAD51DO75771 328 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 SNU13P55769 128 aaKnown RBP8.26□□□□□ -1.09
NOD1-208ENST00000489614 CKS1BP61024 79 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 CEACAM16Q2WEN9 425 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 RNF144BQ7Z419 303 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 OR2C3Q8N628 320 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 KLHDC1Q8N7A1 406 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 C5orf17Q8NAS9 161 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 FAM57AQ8TBR7 257 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 NUDT16L1Q9BRJ7 211 aaKnown RBP8.26□□□□□ -1.09
NOD1-208ENST00000489614 THYN1Q9P016 225 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 COL6A6A6NMZ7 2263 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 IGSF23A1L1A6 192 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 C5orf63A6NC05 138 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 CBLN1P23435 193 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 TCTEX1D1Q8N7M0 179 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 GJC3Q8NFK1 279 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 OR1K1Q8NGR3 316 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 EMG1Q92979 244 aaKnown RBP8.26□□□□□ -1.09
NOD1-208ENST00000489614 VSIRQ9H7M9 311 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 TBL2Q9Y4P3 447 aaKnown RBP8.26□□□□□ -1.09
NOD1-208ENST00000489614 PXMP4Q9Y6I8 212 aa8.26□□□□□ -1.09
NOD1-208ENST00000489614 CACNA1DQ01668 2161 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 SVILO95425 2214 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 TRAV8-6A0A0B4J262 113 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 MSTNO14793 375 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 NUDT3O95989 172 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 HAND1O96004 215 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 GNRHRP30968 328 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 TIMP3P35625 211 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 AMTP48728 403 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 DYNLT3P51808 116 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 RPL15P61313 204 aaKnown RBP8.25□□□□□ -1.09
NOD1-208ENST00000489614 SRPXP78539 464 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 PSG4Q00888 419 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 SRSF7Q16629 238 aaKnown RBP eCLIP8.25□□□□□ -1.09
NOD1-208ENST00000489614 TMEM177Q53S58 311 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 PLAC9Q5JTB6 97 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 KCNIP4Q6PIL6 250 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 Q8N976 141 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 SPSB4Q96A44 273 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 UHRF2Q96PU4 802 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 OR2H1Q9GZK4 316 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 PBOV1Q9GZY1 135 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 CISD1Q9NZ45 108 aaKnown RBP8.25□□□□□ -1.09
NOD1-208ENST00000489614 MRPS16Q9Y3D3 137 aaKnown RBP8.25□□□□□ -1.09
NOD1-208ENST00000489614 PPIAL4EA0A075B759 164 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 PPIAL4CA0A0B4J2A2 164 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 PPIAL4DF5H284 164 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 MRPL33O75394 65 aaKnown RBP8.25□□□□□ -1.09
NOD1-208ENST00000489614 PPIAL4FP0DN26 164 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 ESDP10768 282 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 PHLDA2Q53GA4 152 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 FAM222BQ8WU58 562 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 NRN1Q9NPD7 142 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 RPRMQ9NS64 109 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 JKAMPQ9P055 326 aa8.25□□□□□ -1.09
NOD1-208ENST00000489614 RTTNQ86VV8 2226 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 MUC21A0A0G2JKD1 596 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 MUC21A0A140T8X8 626 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 DPRXA6NFQ7 191 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 ZNHIT1O43257 154 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 SSSCA1O60232 199 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 OPRM1P35372 400 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 TMEM267Q0VDI3 215 aaPredicted RBP8.24□□□□□ -1.09
NOD1-208ENST00000489614 VAX1Q5SQQ9 334 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 MUC21Q5SSG8 566 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 FAM214BQ7L5A3 538 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 C1orf162Q8NEQ5 155 aaPredicted RBP8.24□□□□□ -1.09
NOD1-208ENST00000489614 OR2Z1Q8NG97 314 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 OR8B12Q8NGG6 310 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 ARHGAP5-AS1Q96IT6 56 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 EMC9Q9Y3B6 208 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 IGHV2-26A0A0B4J1V2 119 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 PIGPP57054 158 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 ZNF121P58317 390 aaPredicted RBP8.24□□□□□ -1.09
NOD1-208ENST00000489614 ZNF154Q13106 437 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 LRRC10Q5BKY1 277 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 FAM71F2Q6NXP2 309 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 CYP2G1PQ6ZSU1 146 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 OR8G5Q8NG78 346 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 PLPPR1Q8TBJ4 325 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 RTN4IP1Q8WWV3 396 aaPredicted RBP8.24□□□□□ -1.09
NOD1-208ENST00000489614 POM121L2Q96KW2 1035 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 CHRDL1Q9BU40 450 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 C1QTNF5Q9BXJ0 243 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 FNDC4Q9H6D8 234 aaPredicted RBP8.24□□□□□ -1.09
NOD1-208ENST00000489614 ERRFI1Q9UJM3 462 aaPredicted RBP8.24□□□□□ -1.09
NOD1-208ENST00000489614 NBEAQ8NFP9 2946 aa8.24□□□□□ -1.09
NOD1-208ENST00000489614 GAGE10A6NGK3 116 aa8.23□□□□□ -1.09
NOD1-208ENST00000489614 ZNF207O43670 478 aaKnown RBP8.23□□□□□ -1.09
NOD1-208ENST00000489614 NTF3P20783 257 aa8.23□□□□□ -1.09
NOD1-208ENST00000489614 IGHV1-2P23083 117 aa8.23□□□□□ -1.09
NOD1-208ENST00000489614 FXYD4P59646 89 aa8.23□□□□□ -1.09
NOD1-208ENST00000489614 IL13RA2Q14627 380 aa8.23□□□□□ -1.09
NOD1-208ENST00000489614 KLHL24Q6TFL4 600 aa8.23□□□□□ -1.09
NOD1-208ENST00000489614 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms