RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 IGKV1-39P01597 117 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 IGKV1D-39P04432 117 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 CTSDP07339 412 aaPredicted RBP6.54□□□□□ -1.36
SF1-218ENST00000489544 MYOD1P15172 320 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 F2RP25116 425 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 FAUP35544 74 aaKnown RBP6.54□□□□□ -1.36
SF1-218ENST00000489544 LPAR6P43657 344 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 VDAC2P45880 294 aaPredicted RBP6.54□□□□□ -1.36
SF1-218ENST00000489544 LGALS7P47929 136 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 PROK1P58294 105 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 SSBP2P81877 361 aaPredicted RBP6.54□□□□□ -1.36
SF1-218ENST00000489544 CATR1Q13166 79 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 CBX3Q13185 183 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 LIN54Q6MZP7 749 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 LPCAT3Q6P1A2 487 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 SLC35E3Q7Z769 313 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 ZNF329Q86UD4 541 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 KLHDC1Q8N7A1 406 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 OR4S2Q8NH73 311 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 ZFAND1Q8TCF1 268 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 TMEM230Q96A57 120 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 TP53RKQ96S44 253 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 RNF5Q99942 180 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 FAM103A1Q9BTL3 118 aaKnown RBP6.54□□□□□ -1.36
SF1-218ENST00000489544 CCDC32Q9BV29 185 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 WDR12Q9GZL7 423 aaKnown RBP6.54□□□□□ -1.36
SF1-218ENST00000489544 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 COPZ2Q9P299 210 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 SCP2D1Q9UJQ7 156 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 FLVCR2Q9UPI3 526 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 WSB1Q9Y6I7 421 aa6.54□□□□□ -1.36
SF1-218ENST00000489544 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 G3V318 75 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 ARPC1BO15143 372 aaKnown RBP6.53□□□□□ -1.36
SF1-218ENST00000489544 ATP6V0E1O15342 81 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 UPK1BO75841 260 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 KRASP01116 189 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 IGHG2P01859 326 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 HLA-DRB1P01911 266 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 OR5AC1P0C628 307 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 AKR1C4P17516 323 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 G6PCP35575 357 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 KIR2DS2P43631 304 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 COMPP49747 757 aaPredicted RBP6.53□□□□□ -1.36
SF1-218ENST00000489544 UBE2KP61086 200 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 RND3P61587 244 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 GNB1P62873 340 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 CX3CL1P78423 397 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 VMA21Q3ZAQ7 101 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 C10orf55Q5SWW7 151 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 C12orf54Q6X4T0 127 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 TMED4Q7Z7H5 227 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 POC5Q8NA72 575 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 OSR1Q8TAX0 266 aaPredicted RBP6.53□□□□□ -1.36
SF1-218ENST00000489544 WFDC12Q8WWY7 111 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 BORCS5Q969J3 196 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 R3HDM4Q96D70 268 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 ZNF486Q96H40 463 aaPredicted RBP6.53□□□□□ -1.36
SF1-218ENST00000489544 RHOVQ96L33 236 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 PARP11Q9NR21 331 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 TBC1D24Q9ULP9 559 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 C14orf166Q9Y224 244 aaKnown RBP6.53□□□□□ -1.36
SF1-218ENST00000489544 MMP24Q9Y5R2 645 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 PLXNB1O43157 2135 aa6.53□□□□□ -1.36
SF1-218ENST00000489544 TEX13DA0A0J9YY54 714 aaPredicted RBP6.52□□□□□ -1.37
SF1-218ENST00000489544 C3orf85A0A1B0GTC6 90 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 H0Y980 276 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 RBFOX2O43251 390 aaKnown RBP eCLIP6.52□□□□□ -1.37
SF1-218ENST00000489544 LYRM1O43325 122 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 SPDEFO95238 335 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 HPRT1P00492 218 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 OPN1MWP04001 364 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 APELAP0DMC3 54 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 OPN1MW2P0DN77 364 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 OPN1MW3P0DN78 364 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 EGR2P11161 476 aaPredicted RBP6.52□□□□□ -1.37
SF1-218ENST00000489544 S100GP29377 79 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 ECI1P42126 302 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 SUPT4H1P63272 117 aaKnown RBP6.52□□□□□ -1.37
SF1-218ENST00000489544 FXYD3Q14802 87 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 SURF2Q15527 256 aaPredicted RBP6.52□□□□□ -1.37
SF1-218ENST00000489544 PRSS8Q16651 343 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 IZUMO4Q1ZYL8 232 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 OR4A47Q6IF82 309 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 PPP1R27Q86WC6 154 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 PUSL1Q8N0Z8 303 aaKnown RBP6.52□□□□□ -1.37
SF1-218ENST00000489544 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 GRPEL2Q8TAA5 225 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 LHFPL5Q8TAF8 219 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 ABHD5Q8WTS1 349 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 CASTOR1Q8WTX7 329 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 OR51J1Q9H342 316 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 NAA60Q9H7X0 242 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 ZNF430Q9H8G1 570 aaPredicted RBP6.52□□□□□ -1.37
SF1-218ENST00000489544 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 TMEM140Q9NV12 185 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 NSG2Q9Y328 171 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms