RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZNF818PQ6ZRF7 136 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 LCNL1Q6ZST4 164 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 OR52I2Q8NH67 350 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 DIRAS2Q96HU8 199 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 TMEM68Q96MH6 324 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 FAM103A1Q9BTL3 118 aaKnown RBP13.56□□□□□ -0.24
MDC1-206ENST00000489540 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
MDC1-206ENST00000489540 C6orf62Q9GZU0 229 aaPredicted RBP13.56□□□□□ -0.24
MDC1-206ENST00000489540 A0A1W2PN81 502 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 GABARAPH6UMI1 98 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 RBFOX2O43251 390 aaKnown RBP eCLIP13.55□□□□□ -0.24
MDC1-206ENST00000489540 HRASP01112 189 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 CHRNA7P36544 502 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 BRWD1-AS2P59051 145 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 PYHIN1Q6K0P9 492 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 C18orf65Q6ZTR6 163 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 C8orf86Q6ZUL3 223 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 CMTM1Q8IZ96 169 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 LFNGQ8NES3 379 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 GRPEL2Q8TAA5 225 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 VSTM2AQ8TAG5 236 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 MYOZ3Q8TDC0 251 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 CD300LFQ8TDQ1 290 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 UBE2E2Q96LR5 201 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 KLK15Q9H2R5 256 aa13.55□□□□□ -0.24
MDC1-206ENST00000489540 IFNA6P05013 189 aa13.54□□□□□ -0.24
MDC1-206ENST00000489540 SAA1P0DJI8 122 aaPredicted RBP13.54□□□□□ -0.24
MDC1-206ENST00000489540 CD33P20138 364 aa13.54□□□□□ -0.24
MDC1-206ENST00000489540 TBPP20226 339 aa13.54□□□□□ -0.24
MDC1-206ENST00000489540 SSBP1Q04837 148 aaKnown RBP13.54□□□□□ -0.24
MDC1-206ENST00000489540 RNASE12Q5GAN4 147 aaKnown RBP13.54□□□□□ -0.24
MDC1-206ENST00000489540 SPAG16Q8N0X2 631 aa13.54□□□□□ -0.24
MDC1-206ENST00000489540 POC5Q8NA72 575 aa13.54□□□□□ -0.24
MDC1-206ENST00000489540 MCFD2Q8NI22 146 aa13.54□□□□□ -0.24
MDC1-206ENST00000489540 RSL24D1Q9UHA3 163 aaKnown RBP13.54□□□□□ -0.24
MDC1-206ENST00000489540 ZNF701M0R085 212 aaPredicted RBP13.53□□□□□ -0.24
MDC1-206ENST00000489540 GPR31O00270 319 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 CTDSPLO15194 276 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 PGLYRP1O75594 196 aaPredicted RBP13.53□□□□□ -0.24
MDC1-206ENST00000489540 ACTL6BO94805 426 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 OR2A4O95047 310 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 S100GP29377 79 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 SSBP2P81877 361 aaPredicted RBP13.53□□□□□ -0.24
MDC1-206ENST00000489540 KIAA0141Q14154 515 aaPredicted RBP13.53□□□□□ -0.24
MDC1-206ENST00000489540 MRGPRG-AS1Q2M3A8 158 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 RNASE10Q5GAN6 216 aaKnown RBP13.53□□□□□ -0.24
MDC1-206ENST00000489540 AADACL3Q5VUY0 350 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 IDO2Q6ZQW0 420 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 MMD2Q8IY49 270 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 C4orf3Q8WVX3 66 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 OR2A7Q96R45 310 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 NXF2Q9GZY0 626 aaKnown RBP13.53□□□□□ -0.24
MDC1-206ENST00000489540 VSIG4Q9Y279 399 aa13.53□□□□□ -0.24
MDC1-206ENST00000489540 VWFP04275 2813 aa13.52□□□□□ -0.24
MDC1-206ENST00000489540 CMYA5Q8N3K9 4069 aa13.52□□□□□ -0.24
MDC1-206ENST00000489540 CCL24O00175 119 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 SOX15O60248 233 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 HPRT1P00492 218 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 UCP3P55916 312 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 IL18Q14116 193 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 TNXAQ16473 311 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 ETV3LQ6ZN32 361 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
MDC1-206ENST00000489540 VKORC1L1Q8N0U8 176 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 TMEM229BQ8NBD8 167 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 OR51H1Q8NH63 302 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 RHOVQ96L33 236 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 P2RX4Q99571 388 aa13.52□□□□□ -0.25
MDC1-206ENST00000489540 RBM38Q9H0Z9 239 aaKnown RBP13.52□□□□□ -0.25
MDC1-206ENST00000489540 ZNF430Q9H8G1 570 aaPredicted RBP13.52□□□□□ -0.25
MDC1-206ENST00000489540 MSGN1A6NI15 193 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 H3BUA1 57 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 M0QYG6 137 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 RAMP3O60896 148 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 CD3DP04234 171 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 TAS2R31P59538 309 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 TAS2R19P59542 299 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 DGCR2P98153 550 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 PUSL1Q8N0Z8 303 aaKnown RBP13.51□□□□□ -0.25
MDC1-206ENST00000489540 ARRDC1Q8N5I2 433 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 LINC00482Q8N8I6 264 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 TMEM167AQ8TBQ9 72 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 RCC1LQ96I51 464 aaKnown RBP13.51□□□□□ -0.25
MDC1-206ENST00000489540 RAX2Q96IS3 184 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 FXYD6Q9H0Q3 95 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 SLA2Q9H6Q3 261 aa13.51□□□□□ -0.25
MDC1-206ENST00000489540 G3V4G9 280 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 KBTBD11O94819 623 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 DUS4LO95620 317 aaKnown RBP13.5□□□□□ -0.25
MDC1-206ENST00000489540 CD74P04233 296 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 NQO2P16083 231 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 TNFSF8P32971 234 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 MAS1LP35410 378 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 RUNX1Q01196 453 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 DEFA6Q01524 100 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 SLC38A6Q8IZM9 456 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms