RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 MBD2Q9UBB5 411 aa6.29□□□□□ -1.4
SMC6-209ENST00000489535 PRELID3BQ9Y3B1 194 aa6.29□□□□□ -1.4
SMC6-209ENST00000489535 LSM5Q9Y4Y9 91 aaKnown RBP6.29□□□□□ -1.4
SMC6-209ENST00000489535 COL12A1Q99715 3063 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 IGHV2-26A0A0B4J1V2 119 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 A8MXK9 166 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 VWC2LB2RUY7 222 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 K7EPK0 472 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 L7N2F9 121 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 M0R1W7 72 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 ENSAO43768 121 aaKnown RBP6.28□□□□□ -1.4
SMC6-209ENST00000489535 ATG12O94817 140 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 IGKV1-5P01602 117 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 PAX1P15863 534 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 CXCL2P19875 107 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 COX7A1P24310 79 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 ZFP36P26651 326 aaKnown RBP6.28□□□□□ -1.4
SMC6-209ENST00000489535 IL3RAP26951 378 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 G6PCP35575 357 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 PRRX1P54821 245 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 BRWD1-AS2P59051 145 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 PRB3Q04118 309 aaPredicted RBP6.28□□□□□ -1.4
SMC6-209ENST00000489535 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 PRSS54Q6PEW0 395 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 ZNF833PQ6ZTB9 187 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 ZNF546Q86UE3 836 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 FAM71E2Q8N5Q1 922 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 Q8N7P7 452 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 OR4D5Q8NGN0 318 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 OR1S1Q8NH92 325 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 CD300LFQ8TDQ1 290 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 DDB2Q92466 427 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 TNFRSF14Q92956 283 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 LSM10Q969L4 123 aaKnown RBP6.28□□□□□ -1.4
SMC6-209ENST00000489535 TMEM186Q96B77 213 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 RRNAD1Q96FB5 475 aaKnown RBP6.28□□□□□ -1.4
SMC6-209ENST00000489535 ADTRPQ96IZ2 230 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 CLEC7AQ9BXN2 247 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 SIRT7Q9NRC8 400 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 OR5AC2Q9NZP5 309 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 RCL1Q9Y2P8 373 aaKnown RBP6.28□□□□□ -1.4
SMC6-209ENST00000489535 TENM4Q6N022 2769 aa6.28□□□□□ -1.4
SMC6-209ENST00000489535 CHD6Q8TD26 2715 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 IGHV4-30-2A0A087WSY4 118 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 IGHV4-61A0A0C4DH41 118 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 IGHV2-70DA0A0C4DH43 119 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 A0A1B0GU03 582 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 FAM157AC9JC47 383 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 H0YIZ8 118 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 PLXNB1O43157 2135 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 TSC22D2O75157 780 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 FOXH1O75593 365 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 NXPH3O95157 252 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 HPRT1P00492 218 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 APOA2P02652 100 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 MBPP02686 304 aaPredicted RBP6.27□□□□□ -1.41
SMC6-209ENST00000489535 RLN2P04090 185 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 CT45A6P0DMU7 189 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 CT45A5P0DMU8 189 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 CT45A7P0DMV0 189 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 LYL1P12980 280 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 NUP62P37198 522 aaPredicted RBP6.27□□□□□ -1.41
SMC6-209ENST00000489535 NKX2-1P43699 371 aaPredicted RBP6.27□□□□□ -1.41
SMC6-209ENST00000489535 REG1BP48304 166 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 AP2S1P53680 142 aaPredicted RBP6.27□□□□□ -1.41
SMC6-209ENST00000489535 DSCR9P59020 149 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 KLRD1Q13241 179 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 IZUMO4Q1ZYL8 232 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 HLA-DRB5Q30154 266 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 HIST2H2BCQ6DN03 193 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 FAM71F2Q6NXP2 309 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 TMEM65Q6PI78 240 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 VMO1Q7Z5L0 202 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 PNKDQ8N490 385 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 KIR3DL3Q8N743 410 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 ZNF383Q8NA42 475 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 OR13D1Q8NGV5 346 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 OR4S2Q8NH73 311 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 R3HDM4Q96D70 268 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 RNF126Q9BV68 326 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 MRPL20Q9BYC9 149 aaKnown RBP6.27□□□□□ -1.41
SMC6-209ENST00000489535 MFFQ9GZY8 342 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 SLC35D1Q9NTN3 355 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 ZFP57Q9NU63 452 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 CACNG5Q9UF02 275 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 TNFSF18Q9UNG2 199 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 MMP24Q9Y5R2 645 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 POMT1Q9Y6A1 747 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 TNCP24821 2201 aa6.27□□□□□ -1.41
SMC6-209ENST00000489535 MARCH11A6NNE9 402 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 WRBO00258 174 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 ST8SIA3O43173 380 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 RBFOX2O43251 390 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMC6-209ENST00000489535 DEDDO75618 318 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 SNAPC5O75971 98 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 CRYZL1O95825 349 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 KRASP01116 189 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 IGLV1-47P01700 117 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 ARG1P05089 322 aa6.26□□□□□ -1.41
SMC6-209ENST00000489535 SLC25A6P12236 298 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms