RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RBMY1A1P0DJD3 496 aaKnown RBP6.64□□□□□ -1.35
SSBP1-212ENST00000489378 RBMY1CP0DJD4 496 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 ZNF19P17023 458 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 ZNF93P35789 620 aaPredicted RBP6.64□□□□□ -1.35
SSBP1-212ENST00000489378 MAP2K4P45985 399 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 SOX2P48431 317 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 MNAT1P51948 309 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 MED21Q13503 144 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 FAM106AQ4KMX7 169 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 DDI2Q5TDH0 399 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 SIGIRRQ6IA17 410 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 OR4A47Q6IF82 309 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 SRSF12Q8WXF0 261 aaKnown RBP6.64□□□□□ -1.35
SSBP1-212ENST00000489378 DNAJC9Q8WXX5 260 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 C4orf36Q96KX1 117 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 CHRDL1Q9BU40 450 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 JAM3Q9BX67 310 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 C5orf66Q9H5L9 145 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 ISG20L2Q9H9L3 353 aaKnown RBP6.64□□□□□ -1.35
SSBP1-212ENST00000489378 ARL8BQ9NVJ2 186 aa6.64□□□□□ -1.35
SSBP1-212ENST00000489378 DAPL1A0PJW8 107 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
SSBP1-212ENST00000489378 E9PI62 339 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 J3QRE1 110 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 ZNF780AO75290 641 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-212ENST00000489378 FAM107AO95990 144 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 IFNA10P01566 189 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 APOA2P02652 100 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 KRTAP10-2P60368 255 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 TNXAQ16473 311 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 SETD9Q8NE22 299 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 SUN5Q8TC36 379 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 CANT1Q8WVQ1 401 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 MARC2Q969Z3 335 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 HARBI1Q96MB7 349 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 OR14A2Q96R54 314 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 FAM107BQ9H098 131 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 C11orf54Q9H0W9 315 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-212ENST00000489378 BANF2Q9H503 90 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 TMEM138Q9NPI0 162 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 SLC35D1Q9NTN3 355 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 RPL36Q9Y3U8 105 aaKnown RBP6.63□□□□□ -1.35
SSBP1-212ENST00000489378 LRRC42Q9Y546 428 aa6.63□□□□□ -1.35
SSBP1-212ENST00000489378 NACAE9PAV3 2078 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 IGHV4-28A0A0C4DH34 117 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 TMEM212A6NML5 194 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 RPSAP08865 295 aaKnown RBP6.62□□□□□ -1.35
SSBP1-212ENST00000489378 FUT3P21217 361 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 PRSS8Q16651 343 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 IDO2Q6ZQW0 420 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 ZNF767PQ75MW2 155 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 TTC9CQ8N5M4 171 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 OR5AK2Q8NH90 309 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 ORAI1Q96D31 301 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 ATP6V0BQ99437 205 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 C6orf62Q9GZU0 229 aaPredicted RBP6.62□□□□□ -1.35
SSBP1-212ENST00000489378 RIBC2Q9H4K1 309 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 MRPL27Q9P0M9 148 aaKnown RBP6.62□□□□□ -1.35
SSBP1-212ENST00000489378 ABRACLQ9P1F3 81 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 OR1A1Q9P1Q5 309 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 HMCN2Q8NDA2 5059 aa6.62□□□□□ -1.35
SSBP1-212ENST00000489378 DEFB131BA0A096LNP1 70 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 IGHV3-35A0A0C4DH35 117 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 M0R1X1 148 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 ITGB1BP1O14713 200 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 CA1P00915 261 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-212ENST00000489378 CD74P04233 296 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 GLAP06280 429 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 BDKRB2P30411 391 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 CAPGP40121 348 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 TMEM187Q14656 261 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 C10orf55Q5SWW7 151 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 ACOT12Q8WYK0 555 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 ZNF184Q99676 751 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-212ENST00000489378 SPXQ9BT56 116 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 NDUFAF3Q9BU61 184 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 SELENOIQ9C0D9 397 aa6.61□□□□□ -1.35
SSBP1-212ENST00000489378 OR4C46A6NHA9 309 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 PDCD6O75340 191 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 PI3P19957 117 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 CEACAM6P40199 344 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 PPP3R1P63098 170 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 GPR176Q14439 515 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 GLIPR1L1Q6UWM5 242 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 UBE2DNLQ8IWF7 75 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 OR13C5Q8NGS8 318 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 ASB9Q96DX5 294 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 CELA1Q9UNI1 258 aa6.6□□□□□ -1.35
SSBP1-212ENST00000489378 HMX3A6NHT5 357 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 AQP12BA6NM10 295 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 MGMTP16455 207 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 GALP22466 123 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 POLR2IP36954 125 aaKnown RBP6.59□□□□□ -1.35
SSBP1-212ENST00000489378 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
SSBP1-212ENST00000489378 C12orf74Q32Q52 190 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 CEACAM19Q7Z692 300 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 SPATA12Q7Z6I5 190 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 LHFPL3Q86UP9 236 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 ACBD7Q8N6N7 88 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 RFKQ969G6 155 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms