RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CNEP1R1Q8N9A8 125 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 OR1L8Q8NGR8 309 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 PRAP1Q96NZ9 151 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 NMNAT3Q96T66 252 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 GPR84Q9NQS5 396 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 KMT2EQ8IZD2 1858 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 IGHV3-15A0A0B4J1V0 119 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 MDFIC2A0A1B0GVS7 189 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 SDHAF1A6NFY7 115 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 A8MUN3 132 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 TRAPPC3O43617 180 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 ATP5HO75947 161 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 IFNA6P05013 189 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 GZMBP10144 247 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 LGALS3P17931 250 aaKnown RBP2.08□□□□□ -2.08
XRN1-213ENST00000489241 GABRA2P47869 451 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 IDH3GP51553 393 aaPredicted RBP2.08□□□□□ -2.08
XRN1-213ENST00000489241 RBM11P57052 281 aaKnown RBP2.08□□□□□ -2.08
XRN1-213ENST00000489241 FABP9Q0Z7S8 132 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 FOXF1Q12946 379 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 SRSF6Q13247 344 aaKnown RBP2.08□□□□□ -2.08
XRN1-213ENST00000489241 TNFAIP8L3Q5GJ75 292 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 SPOPLQ6IQ16 392 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 BRD3OSQ6XYD6 125 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 LRRC25Q8N386 305 aaPredicted RBP2.08□□□□□ -2.08
XRN1-213ENST00000489241 SLC22A24Q8N4F4 322 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 CLDND2Q8NHS1 167 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.08□□□□□ -2.08
XRN1-213ENST00000489241 TXNL4BQ9NX01 149 aaKnown RBP2.08□□□□□ -2.08
XRN1-213ENST00000489241 TAAR3PQ9P1P4 343 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 CHD5Q8TDI0 1954 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 ABCC12Q96J65 1359 aa2.08□□□□□ -2.08
XRN1-213ENST00000489241 H3BPC8 53 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 ZNF73O43830 326 aaPredicted RBP2.07□□□□□ -2.08
XRN1-213ENST00000489241 FGF6P10767 208 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 RPL27AP46776 148 aaKnown RBP2.07□□□□□ -2.08
XRN1-213ENST00000489241 TAS2R30P59541 319 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 TNFRSF9Q07011 255 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 ACOT6Q3I5F7 207 aaPredicted RBP2.07□□□□□ -2.08
XRN1-213ENST00000489241 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.07□□□□□ -2.08
XRN1-213ENST00000489241 TCF24Q7RTU0 167 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 C20orf166-AS1Q96NR2 134 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 TMEM222Q9H0R3 208 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 PSTPIP2Q9H939 334 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 CMTM6Q9NX76 183 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 AK3Q9UIJ7 227 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 PRELID1Q9Y255 219 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 ANGPT4Q9Y264 503 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 ZNF337Q9Y3M9 751 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 MMACHCQ9Y4U1 282 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 DCCP43146 1447 aa2.07□□□□□ -2.08
XRN1-213ENST00000489241 A0A0J9YX75 114 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 A0A1B0GV50 99 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 SMIM9A6NGZ8 99 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 ODF3BA8MYP8 253 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 PLA2G10O15496 165 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 CD79AP11912 226 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 XCL1P47992 114 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 REEP5Q00765 189 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 OR4C16Q8NGL9 310 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 KLK6Q92876 244 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 CNBD2Q96M20 576 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 OR52E6Q96RD3 313 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 TTTY13Q9BZ97 58 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 OTOFQ9HC10 1997 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 FLT4P35916 1363 aa2.06□□□□□ -2.08
XRN1-213ENST00000489241 LCTP09848 1927 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 SDK2Q58EX2 2172 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 ZNF189O75820 626 aaPredicted RBP2.05□□□□□ -2.08
XRN1-213ENST00000489241 GABRA4P48169 554 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 GNA12Q03113 381 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 SMARCD3Q6STE5 483 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 OR13C8Q8NGS7 320 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 SMCR5Q8TEV8 140 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 FGF13Q92913 245 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 PPP1R2P1Q96PQ5 205 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 MIEN1Q9BRT3 115 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 ZNF471Q9BX82 626 aaPredicted RBP2.05□□□□□ -2.08
XRN1-213ENST00000489241 FAM96AQ9H5X1 160 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 PKIGQ9Y2B9 76 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 GRIN2BQ13224 1484 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 NAV1Q8NEY1 1877 aa2.05□□□□□ -2.08
XRN1-213ENST00000489241 A0A1B0GW54 56 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 A0A1W2PQD3 144 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 TMEM235A6NFC5 223 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 C11orf86A6NJI1 115 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 C3orf84H3BNL1 204 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 BHLHE40O14503 412 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 FADS1O60427 444 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 NPYP01303 97 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 ZNF728P0DKX0 622 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 BLVRBP30043 206 aaPredicted RBP2.04□□□□□ -2.08
XRN1-213ENST00000489241 GZMMP51124 257 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 OR4D2P58180 307 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 TAS2R20P59543 309 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 WRNQ14191 1432 aaPredicted RBP eCLIP2.04□□□□□ -2.08
XRN1-213ENST00000489241 GUK1Q16774 197 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 GLT6D1Q7Z4J2 308 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 ZNF675Q8TD23 568 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 TUBA4BQ9H853 241 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms