RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 VMA21Q3ZAQ7 101 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 TMEM268Q5VZI3 342 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 LIN54Q6MZP7 749 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 ZNF695Q8IW36 515 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 TMEM86BQ8N661 226 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 Q8N6K4 173 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 GALNT14Q96FL9 552 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 RBM14Q96PK6 669 aaKnown RBP9.84□□□□□ -0.83
TRAIP-209ENST00000488860 JMJD8Q96S16 334 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 MARVELD1Q9BSK0 173 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 TMEM222Q9H0R3 208 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 FBXL15Q9H469 300 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 PLEKHA2Q9HB19 425 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 METTL1Q9UBP6 276 aaKnown RBP9.84□□□□□ -0.83
TRAIP-209ENST00000488860 TET2Q6N021 2002 aaPredicted RBP9.83□□□□□ -0.84
TRAIP-209ENST00000488860 SH2D7A6NKC9 451 aaPredicted RBP9.83□□□□□ -0.84
TRAIP-209ENST00000488860 GPR137BO60478 399 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 KRASP01116 189 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 IGKV1-39P01597 117 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 IGKV1D-39P04432 117 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 SAA1P0DJI8 122 aaPredicted RBP9.83□□□□□ -0.84
TRAIP-209ENST00000488860 NQO2P16083 231 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 MECP2P51608 486 aaKnown RBP9.83□□□□□ -0.84
TRAIP-209ENST00000488860 SRPXP78539 464 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 SRSF2Q01130 221 aaKnown RBP9.83□□□□□ -0.84
TRAIP-209ENST00000488860 OXA1LQ15070 435 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 PSG5Q15238 335 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 ANKRD55Q3KP44 614 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 LIAT1Q6ZQX7 453 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 C16orf82Q7Z2V1 217 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 LGI3Q8N145 548 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 UXS1Q8NBZ7 420 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 COQ8AQ8NI60 647 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 LHFPL5Q8TAF8 219 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 GLYATL2Q8WU03 294 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 CLCC1Q96S66 551 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 GPN1Q9HCN4 374 aaPredicted RBP9.83□□□□□ -0.84
TRAIP-209ENST00000488860 TPSG1Q9NRR2 321 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 FAM212BQ9NTI7 297 aaPredicted RBP9.83□□□□□ -0.84
TRAIP-209ENST00000488860 C1RLQ9NZP8 487 aa9.83□□□□□ -0.84
TRAIP-209ENST00000488860 MARCH11A6NNE9 402 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 SRRM4A7MD48 611 aaKnown RBP9.82□□□□□ -0.84
TRAIP-209ENST00000488860 RRHO14718 337 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 PRAF2O60831 178 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 NDUFA3O95167 84 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 SPDEFO95238 335 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 IGLV2-23P01705 113 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 LGALS7P47929 136 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 UBA52P62987 128 aaKnown RBP9.82□□□□□ -0.84
TRAIP-209ENST00000488860 C9orf152Q5JTZ5 239 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 SELENOHQ8IZQ5 122 aaKnown RBP9.82□□□□□ -0.84
TRAIP-209ENST00000488860 SLC35G3Q8N808 338 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 MINDY2Q8NBR6 621 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 OR8H1Q8NGG4 311 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 ZNF431Q8TF32 576 aaPredicted RBP9.82□□□□□ -0.84
TRAIP-209ENST00000488860 CHPT1Q8WUD6 406 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 RBPMSQ93062 196 aaKnown RBP9.82□□□□□ -0.84
TRAIP-209ENST00000488860 RHOVQ96L33 236 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 RNF5Q99942 180 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 RASL11BQ9BPW5 248 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 ALX4Q9H161 411 aaPredicted RBP9.82□□□□□ -0.84
TRAIP-209ENST00000488860 RAB18Q9NP72 206 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 TMEM140Q9NV12 185 aa9.82□□□□□ -0.84
TRAIP-209ENST00000488860 CREBL2O60519 120 aaPredicted RBP9.81□□□□□ -0.84
TRAIP-209ENST00000488860 ATG12O94817 140 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 DUS4LO95620 317 aaKnown RBP9.81□□□□□ -0.84
TRAIP-209ENST00000488860 CDS2O95674 445 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 IL5P05113 134 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 RAG2P55895 527 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 UBE2KP61086 200 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 GNB1P62873 340 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 TATDN3Q17R31 274 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 C5orf64Q2M2E5 130 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 ARSJQ5FYB0 599 aaPredicted RBP9.81□□□□□ -0.84
TRAIP-209ENST00000488860 OR4A47Q6IF82 309 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 H2BFWTQ7Z2G1 175 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 C5orf56Q8N8D9 126 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 Q8N9W7 124 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 NPBQ8NG41 125 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 VSTM2AQ8TAG5 236 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 RRNAD1Q96FB5 475 aaKnown RBP9.81□□□□□ -0.84
TRAIP-209ENST00000488860 PHB2Q99623 299 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 AIFM2Q9BRQ8 373 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 PLSCR3Q9NRY6 295 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 ALG5Q9Y673 324 aa9.81□□□□□ -0.84
TRAIP-209ENST00000488860 A0A0A6YYJ9 748 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 A0A0B4J293 547 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 FAM181BA6NEQ2 426 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 CLDN34H7C241 214 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 TRIM77I1YAP6 450 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 M0QZK8 103 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 FGF16O43320 207 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 KBTBD11O94819 623 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 OR2A4O95047 310 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 CA2P00918 260 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 IGKV1-5P01602 117 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 CRYBA1P05813 215 aa9.8□□□□□ -0.84
TRAIP-209ENST00000488860 RNASE1P07998 156 aaKnown RBP9.8□□□□□ -0.84
TRAIP-209ENST00000488860 HOXB5P09067 269 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms