RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 EMG1Q92979 244 aaKnown RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 LEAP2Q969E1 77 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 PRRC1Q96M27 445 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 NMNAT3Q96T66 252 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 FMO2Q99518 471 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 RARRES2Q99969 163 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 NDUFAF3Q9BU61 184 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 NMNAT2Q9BZQ4 307 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 CST11Q9H112 138 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 NIPAL2Q9H841 368 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF355PQ9NSJ1 428 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 VAPAQ9P0L0 249 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF581Q9P0T4 197 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 PSG11Q9UQ72 335 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 SH3GLB1Q9Y371 365 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 KBTBD11-OT1A0A1B0GTJ5 212 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 PQLC2LA1A4F0 135 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 ODAMA1E959 279 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 SDHDO14521 159 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 DEFB4AO15263 64 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 TGOLN2O43493 480 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 FCGR3BO75015 233 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 IFNA21P01568 189 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 IFNA14P01570 189 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 IFNA17P01571 189 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 TRBV12-3P01733 135 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 SMR3BP02814 79 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-217ENST00000487825 TRGV3P03979 118 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 CGB3P0DN86 165 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 CGB7P0DN87 165 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 IDO1P14902 403 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 GNG10P50151 68 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 POLR2JP52435 117 aaKnown RBP3.15□□□□□ -1.91
BRCA1-217ENST00000487825 MMDQ15546 238 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 RPEL1Q2QD12 228 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 ANKRD55Q3KP44 614 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 ACTBL2Q562R1 376 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 SPANXN2Q5MJ10 180 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 PLCXD3Q63HM9 321 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 FAHD1Q6P587 224 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 DPY19L2P2Q6ZN68 376 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 LINC00596Q86U02 117 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 OFCC1Q8IZS5 231 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 RDH10Q8IZV5 341 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 TMEM61Q8N0U2 210 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF565Q8N9K5 539 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 BPIFCQ8NFQ6 507 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 OR8B12Q8NGG6 310 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 OR9I1Q8NGQ6 314 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 FAM81AQ8TBF8 368 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 RTN4IP1Q8WWV3 396 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-217ENST00000487825 LZICQ8WZA0 190 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 AUNIPQ9H7T9 357 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 NEK6Q9HC98 313 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 TECRQ9NZ01 308 aaKnown RBP3.15□□□□□ -1.91
BRCA1-217ENST00000487825 DNAJC27Q9NZQ0 273 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 ABCD2Q9UBJ2 740 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 GPR132Q9UNW8 380 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 ERGIC3Q9Y282 383 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 NUBP2Q9Y5Y2 271 aa3.15□□□□□ -1.91
BRCA1-217ENST00000487825 A0A087WUU8 490 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 A0A0G2JLM5 398 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 A0A1W2PPE3 182 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 DHRS12A0PJE2 317 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 TVP23AA6NH52 213 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 EVPLLA8MZ36 301 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 LOC110117498-PIK3R3F6TDL0 507 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 CXCR6O00574 342 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ARPC3O15145 178 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 TNFSF12O43508 249 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 SULT1B1O43704 296 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 APOA1P02647 267 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 CSN2P05814 226 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 BPGMP07738 259 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 SPP1P10451 314 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 HIST1H1CP16403 213 aaKnown RBP3.14□□□□□ -1.91
BRCA1-217ENST00000487825 CD40LGP29965 261 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 PYCR1P32322 319 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 VHLP40337 213 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 RPL14P50914 215 aaKnown RBP3.14□□□□□ -1.91
BRCA1-217ENST00000487825 RIDAP52758 137 aaKnown RBP3.14□□□□□ -1.91
BRCA1-217ENST00000487825 CDC42P60953 191 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 AESQ08117 197 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 TMEM267Q0VDI3 215 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-217ENST00000487825 CYP51A1Q16850 503 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 C5orf64Q2M2E5 130 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 AKIRIN2Q53H80 203 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 TEX30Q5JUR7 227 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ATAD3CQ5T2N8 411 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF684Q5T5D7 378 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF730Q6ZMV8 503 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 MBOAT2Q6ZWT7 520 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF767PQ75MW2 155 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 Q8NAQ8 132 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 OR13C5Q8NGS8 318 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 OR11H2Q8NH07 326 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 OR4K13Q8NH42 304 aa3.14□□□□□ -1.91
BRCA1-217ENST00000487825 RNF133Q8WVZ7 376 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms