RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 TLE4Q04727 773 aa16.65■□□□□ 0.26
PHF1-209ENST00000487667 PDLIM3Q53GG5 364 aaPredicted RBP16.65■□□□□ 0.26
PHF1-209ENST00000487667 UTF1Q5T230 341 aa16.65■□□□□ 0.26
PHF1-209ENST00000487667 ZNF429Q86V71 674 aa16.65■□□□□ 0.26
PHF1-209ENST00000487667 ABHD12Q8N2K0 398 aa16.65■□□□□ 0.26
PHF1-209ENST00000487667 GNPNAT1Q96EK6 184 aaPredicted RBP16.65■□□□□ 0.26
PHF1-209ENST00000487667 SLC35D1Q9NTN3 355 aa16.65■□□□□ 0.26
PHF1-209ENST00000487667 YLPM1P49750 1951 aaKnown RBP16.65■□□□□ 0.26
PHF1-209ENST00000487667 CT45A6P0DMU7 189 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 CT45A5P0DMU8 189 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 CT45A7P0DMV0 189 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 SULT1A2P50226 295 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 SPCS3P61009 180 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 GNB2P62879 340 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 RPP30P78346 268 aaKnown RBP16.64■□□□□ 0.26
PHF1-209ENST00000487667 C1orf229Q6ZS94 237 aaPredicted RBP16.64■□□□□ 0.26
PHF1-209ENST00000487667 LY6G5BQ8NDX9 201 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 OSR1Q8TAX0 266 aaPredicted RBP16.64■□□□□ 0.26
PHF1-209ENST00000487667 DTD1Q8TEA8 209 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 TSNAXQ99598 290 aaKnown RBP16.64■□□□□ 0.26
PHF1-209ENST00000487667 ATP5SQ99766 215 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 WFDC1Q9HC57 220 aa16.64■□□□□ 0.26
PHF1-209ENST00000487667 RNF224P0DH78 156 aa16.64■□□□□ 0.25
PHF1-209ENST00000487667 DYNLT3P51808 116 aa16.64■□□□□ 0.25
PHF1-209ENST00000487667 RHOVQ96L33 236 aa16.64■□□□□ 0.25
PHF1-209ENST00000487667 MS4A7Q9GZW8 240 aaPredicted RBP16.64■□□□□ 0.25
PHF1-209ENST00000487667 TMEM140Q9NV12 185 aa16.64■□□□□ 0.25
PHF1-209ENST00000487667 CST7O76096 145 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 IFNA5P01569 189 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 SPP1P10451 314 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 IAPPP10997 89 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 RAB13P51153 203 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 ERVFRD-1P60508 538 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 C10orf91Q5T1B1 145 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 PXDC1Q5TGL8 231 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 ZNF295-AS1Q8N0V1 137 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 C11orf42Q8N5U0 333 aa16.63■□□□□ 0.25
PHF1-209ENST00000487667 BSCL2Q96G97 398 aaPredicted RBP16.63■□□□□ 0.25
PHF1-209ENST00000487667 STRAPQ9Y3F4 350 aaKnown RBP16.63■□□□□ 0.25
PHF1-209ENST00000487667 AMMECR1Q9Y4X0 333 aaPredicted RBP16.63■□□□□ 0.25
PHF1-209ENST00000487667 CEBPZOSA8MTT3 80 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 MC5RP33032 325 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 PJVKQ0ZLH3 352 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 CLINT1Q14677 625 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 CLEC9AQ6UXN8 241 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 PDPNQ86YL7 162 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 BEND2Q8NDZ0 799 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 OR5AN1Q8NGI8 311 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 SSBP3Q9BWW4 388 aaPredicted RBP16.62■□□□□ 0.25
PHF1-209ENST00000487667 ZNF705EA8MWA4 302 aaPredicted RBP16.62■□□□□ 0.25
PHF1-209ENST00000487667 TSPAN4O14817 238 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 IFNA17P01571 189 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 CDKN1AP38936 164 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 ATP6V1FQ16864 119 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 SPANXN5Q5MJ07 72 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 TMEM14EPQ6UXP3 125 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 SVBPQ8N300 66 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 ST6GALNAC6Q969X2 333 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 NARS2Q96I59 477 aaKnown RBP16.62■□□□□ 0.25
PHF1-209ENST00000487667 CLEC7AQ9BXN2 247 aa16.62■□□□□ 0.25
PHF1-209ENST00000487667 M0R1W7 72 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 OVOL3O00110 214 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 FBXO24O75426 580 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 OR9G9P0C7N8 305 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 RELBQ01201 579 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 TMEM217Q8N7C4 229 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 OR13D1Q8NGV5 346 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 PARD6GQ9BYG4 376 aaPredicted RBP16.61■□□□□ 0.25
PHF1-209ENST00000487667 NKX6-2Q9C056 277 aaPredicted RBP16.61■□□□□ 0.25
PHF1-209ENST00000487667 FKBP11Q9NYL4 201 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 PRNDQ9UKY0 176 aa16.61■□□□□ 0.25
PHF1-209ENST00000487667 CARHSP1Q9Y2V2 147 aaKnown RBP16.61■□□□□ 0.25
PHF1-209ENST00000487667 UMAD1C9J7I0 102 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 H3BP45 60 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 TRIM77I1YAP6 450 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 LY6HO94772 140 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 DEFA5Q01523 94 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 SSX9Q7RTT3 188 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 TGIF2LXQ8IUE1 241 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 PINX1Q96BK5 328 aaKnown RBP16.6■□□□□ 0.25
PHF1-209ENST00000487667 HIPK2Q9H2X6 1198 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 PARP11Q9NR21 331 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 FOXA2Q9Y261 457 aaPredicted RBP16.6■□□□□ 0.25
PHF1-209ENST00000487667 LOC105371242A0A075B767 164 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 IGHV2-26A0A0B4J1V2 119 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 C15orf61A6NNL5 157 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 DNASE2O00115 360 aaPredicted RBP16.6■□□□□ 0.25
PHF1-209ENST00000487667 TMEM177Q53S58 311 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 OR4A47Q6IF82 309 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 C1orf122Q6ZSJ8 110 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 PUSL1Q8N0Z8 303 aaKnown RBP16.6■□□□□ 0.25
PHF1-209ENST00000487667 OR4C13Q8NGP0 309 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 VSTM2AQ8TAG5 236 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 QTRT1Q9BXR0 403 aaKnown RBP16.6■□□□□ 0.25
PHF1-209ENST00000487667 MRPL20Q9BYC9 149 aaKnown RBP16.6■□□□□ 0.25
PHF1-209ENST00000487667 BET1LQ9NYM9 111 aa16.6■□□□□ 0.25
PHF1-209ENST00000487667 H0YJW9 148 aa16.59■□□□□ 0.25
PHF1-209ENST00000487667 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.253e-6■■■■□ 24
PHF1-209ENST00000487667 SLC25A24Q6NUK1 477 aa16.59■□□□□ 0.25
PHF1-209ENST00000487667 ATRAIDQ6UW56 229 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms