RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 DCUN1D4Q92564 292 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 RHOVQ96L33 236 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 CCL28Q9NRJ3 127 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 COMMD3Q9UBI1 195 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 IGHV4OR15-8A0A075B7B6 117 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 A0A087WW49 117 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 MSGN1A6NI15 193 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 CREBL2O60519 120 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-209ENST00000487617 PPYP01298 95 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 SMIM18P0DKX4 95 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 SLURP1P55000 103 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 CDK10Q15131 360 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 ZNF66Q6ZN08 573 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 OR4S2Q8NH73 311 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 GPHA2Q96T91 129 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 SLC5A7Q9GZV3 580 aa15.8■□□□□ 0.12
HDAC4-209ENST00000487617 C13orf42A0A1B0GVH6 325 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 OVOL1O14753 267 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 TNFSF12O43508 249 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 RAMP3O60896 148 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 ACTL6BO94805 426 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 HSPB1P04792 205 aaKnown RBP15.79■□□□□ 0.12
HDAC4-209ENST00000487617 APELAP0DMC3 54 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 FXYD4P59646 89 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 MSMO1Q15800 293 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 ZNF430Q9H8G1 570 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-209ENST00000487617 SCOCQ9UIL1 159 aa15.79■□□□□ 0.12
HDAC4-209ENST00000487617 MPPED1O15442 326 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 EIF4EP06730 217 aaKnown RBP15.78■□□□□ 0.12
HDAC4-209ENST00000487617 PRSS3P35030 304 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 ECI1P42126 302 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 MMD2Q8IY49 270 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 VKORC1L1Q8N0U8 176 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 GIMAP1Q8WWP7 306 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 SRSF12Q8WXF0 261 aaKnown RBP15.78■□□□□ 0.12
HDAC4-209ENST00000487617 DLX4Q92988 240 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-209ENST00000487617 COA4Q9NYJ1 87 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 EHFQ9NZC4 300 aa15.78■□□□□ 0.12
HDAC4-209ENST00000487617 A0A0G2JLM5 398 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 KIR2DS2P43631 304 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 BRWD1-AS2P59051 145 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 HERV-K104P61576 105 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 TMEM17Q86X19 198 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 ANKRD13BQ86YJ7 626 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 ZBTB34Q8NCN2 500 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 TINAGL1Q9GZM7 467 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-209ENST00000487617 NAA50Q9GZZ1 169 aaKnown RBP15.77■□□□□ 0.12
HDAC4-209ENST00000487617 ANAPC10Q9UM13 185 aa15.77■□□□□ 0.12
HDAC4-209ENST00000487617 SMIM31A0A1B0GVY4 71 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 OR2A4O95047 310 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 APOA1P02647 267 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 RORCP51449 518 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 INSL3P51460 131 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 C10orf55Q5SWW7 151 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 VSTM2AQ8TAG5 236 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 CMTM3Q96MX0 182 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 OR2A7Q96R45 310 aa15.76■□□□□ 0.11
HDAC4-209ENST00000487617 GABARAPO95166 117 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 BRI3O95415 125 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 PMP2P02689 132 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 OR9G9P0C7N8 305 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 RFX2P48378 723 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 TAS2R46P59540 309 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 DEFA5Q01523 94 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 CTF1Q16619 201 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 GPR107Q5VW38 600 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 ADAD2Q8NCV1 583 aaKnown RBP15.75■□□□□ 0.11
HDAC4-209ENST00000487617 OR5H2Q8NGV7 314 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 PRR25Q96S07 402 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 SPIN2AQ99865 258 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 SPIN2BQ9BPZ2 258 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 DNAH3Q8TD57 4116 aa15.75■□□□□ 0.11
HDAC4-209ENST00000487617 SULT1C2O00338 296 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 HPGDSO60760 199 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 SAP30O75446 220 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 KBTBD11O94819 623 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 HRASP01112 189 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 NAT1P18440 290 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 CATR1Q13166 79 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 DCTN2Q13561 401 aaKnown RBP15.74■□□□□ 0.11
HDAC4-209ENST00000487617 DYRK1AQ13627 763 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 DHRS11Q6UWP2 260 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 ZNF818PQ6ZRF7 136 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 SSX9Q7RTT3 188 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 ZNF429Q86V71 674 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 SPAG16Q8N0X2 631 aa15.74■□□□□ 0.11
HDAC4-209ENST00000487617 PUSL1Q8N0Z8 303 aaKnown RBP15.74■□□□□ 0.11
HDAC4-209ENST00000487617 ZNF2Q9BSG1 426 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-209ENST00000487617 MRPS26Q9BYN8 205 aaKnown RBP15.74■□□□□ 0.11
HDAC4-209ENST00000487617 RANGRFQ9HD47 186 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-209ENST00000487617 ANKRD34BA5PLL1 514 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 ELK1P19419 428 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 MZT2AQ6P582 158 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 SNX29P2Q8IUI4 249 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 TMEM167AQ8TBQ9 72 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 GPX8Q8TED1 209 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 BORCS5Q969J3 196 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 USMG5Q96IX5 58 aa15.73■□□□□ 0.11
HDAC4-209ENST00000487617 RBFOX2O43251 390 aaKnown RBP eCLIP15.72■□□□□ 0.118e-12■■■■■ 41.1
HDAC4-209ENST00000487617 HLA-DMAP28067 261 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms