RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ACOT12Q8WYK0 555 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 SNAPC3Q92966 411 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 CENPOQ9BU64 300 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 ZNF430Q9H8G1 570 aaPredicted RBP9.27□□□□□ -0.93
VPS16-208ENST00000487461 AKIP1Q9NQ31 210 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 SIGLEC8Q9NYZ4 499 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 TRBV9A0A0B4J1U6 114 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 BMPR1BO00238 502 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 MPPED1O15442 326 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 FCGR3BO75015 233 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 TNFAIP8O95379 198 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 IGLV2-14P01704 120 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 HLA-DQB1P01920 261 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 SAA1P0DJI8 122 aaPredicted RBP9.26□□□□□ -0.93
VPS16-208ENST00000487461 GALP22466 123 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 NFYAP23511 347 aaPredicted RBP9.26□□□□□ -0.93
VPS16-208ENST00000487461 RPL30P62888 115 aaKnown RBP9.26□□□□□ -0.93
VPS16-208ENST00000487461 RHOGP84095 191 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 ATP5G2Q06055 141 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 ADAMTSL5Q6ZMM2 481 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 TTC9CQ8N5M4 171 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 ZNF645Q8N7E2 425 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 DCUN1D5Q9BTE7 237 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 MRPS26Q9BYN8 205 aaKnown RBP9.26□□□□□ -0.93
VPS16-208ENST00000487461 PALMDQ9NP74 551 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 OR2W1Q9Y3N9 320 aa9.26□□□□□ -0.93
VPS16-208ENST00000487461 IGKV1D-13A0A0B4J2D9 117 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 FAM223BA6NKX1 122 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 TUSC2O75896 110 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 OR2A4O95047 310 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 IGKV1-13P0DP09 117 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 EXOSC2Q13868 293 aaKnown RBP9.25□□□□□ -0.93
VPS16-208ENST00000487461 ARL6IP1Q15041 203 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 CDK10Q15131 360 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 C10orf55Q5SWW7 151 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 HACD4Q5VWC8 232 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 LCN12Q6JVE5 192 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 FAM223AQ8IWN6 122 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 VKORC1L1Q8N0U8 176 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 Q8N402 240 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 DGCR14Q96DF8 476 aaKnown RBP9.25□□□□□ -0.93
VPS16-208ENST00000487461 TUBA4BQ9H853 241 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 BLOC1S6Q9UL45 172 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 RBMX2Q9Y388 322 aaKnown RBP9.25□□□□□ -0.93
VPS16-208ENST00000487461 DMRT1Q9Y5R6 373 aa9.25□□□□□ -0.93
VPS16-208ENST00000487461 RYR2Q92736 4967 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.24□□□□□ -0.93
VPS16-208ENST00000487461 LCE6AA0A183 80 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 HMX3A6NHT5 357 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 NOTOA8MTQ0 251 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 OR2J3O76001 311 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 ACTL6BO94805 426 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 CTXN2P0C2S0 81 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 BRWD1-AS2P59051 145 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 OR2B11Q5JQS5 317 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 GTSCR1Q86UQ5 136 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 MMD2Q8IY49 270 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 NUDCD2Q8WVJ2 157 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 ISOC1Q96CN7 298 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 SPIN2AQ99865 258 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 SPIN2BQ9BPZ2 258 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 SPATA25Q9BR10 227 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 YTHDF1Q9BYJ9 559 aaKnown RBP9.24□□□□□ -0.93
VPS16-208ENST00000487461 OR51E2Q9H255 320 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 DCSTAMPQ9H295 470 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 VCX3AQ9NNX9 186 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 TXNL4BQ9NX01 149 aaKnown RBP9.24□□□□□ -0.93
VPS16-208ENST00000487461 PEMTQ9UBM1 199 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 PRELID3BQ9Y3B1 194 aa9.24□□□□□ -0.93
VPS16-208ENST00000487461 TMEM235A6NFC5 223 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 ZNF785A8K8V0 405 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 E7EUB6 86 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 AIREO43918 545 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 SSX5O60225 188 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 IL6RP08887 468 aaPredicted RBP9.23□□□□□ -0.93
VPS16-208ENST00000487461 SMIM18P0DKX4 95 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 FGF9P31371 208 aaPredicted RBP9.23□□□□□ -0.93
VPS16-208ENST00000487461 EIF4EBP1Q13541 118 aaPredicted RBP9.23□□□□□ -0.93
VPS16-208ENST00000487461 CD300EQ496F6 205 aaPredicted RBP9.23□□□□□ -0.93
VPS16-208ENST00000487461 UBE2UQ5VVX9 321 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 CNIH2Q6PI25 160 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 C19orf35Q6ZS72 473 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 KCTD9Q7L273 389 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 NECAP1Q8NC96 275 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 OR2K2Q8NGT1 345 aa9.23□□□□□ -0.93
VPS16-208ENST00000487461 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
VPS16-208ENST00000487461 CSMD3Q7Z407 3707 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 A0A1B0GW64 132 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 PPP5D1E7EU14 171 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 CREBL2O60519 120 aaPredicted RBP9.22□□□□□ -0.93
VPS16-208ENST00000487461 MRPS14O60783 128 aaKnown RBP9.22□□□□□ -0.93
VPS16-208ENST00000487461 SLC22A5O76082 557 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 HLA-AP01891 365 aaKnown RBP9.22□□□□□ -0.93
VPS16-208ENST00000487461 CD36P16671 472 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 EDN2P20800 178 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 GABARAPL2P60520 117 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 DEFB114Q30KQ6 69 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 C15orf32Q32M92 178 aa9.22□□□□□ -0.93
VPS16-208ENST00000487461 CNPY1Q3B7I2 92 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms