RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 GAPDHP04406 335 aaKnown RBP11.54□□□□□ -0.56
CUX1-209ENST00000487284 CT45A6P0DMU7 189 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 CT45A5P0DMU8 189 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 CT45A7P0DMV0 189 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 ARHGDIBP52566 201 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 LCN2P80188 198 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 EWSR1Q01844 656 aaKnown RBP eCLIP11.54□□□□□ -0.56
CUX1-209ENST00000487284 TNFRSF14Q92956 283 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 ST6GALNAC6Q969X2 333 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 SLC25A31Q9H0C2 315 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.54□□□□□ -0.56
CUX1-209ENST00000487284 ZNF469Q96JG9 3925 aaPredicted RBP11.54□□□□□ -0.56
CUX1-209ENST00000487284 LOC105371242A0A075B767 164 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 IGSF23A1L1A6 192 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 FAM24AA6NFZ4 105 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 LIPFP07098 398 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 NQO2P16083 231 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 CAV2P51636 162 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 RAB14P61106 215 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
CUX1-209ENST00000487284 TNFRSF9Q07011 255 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 POU2AF1Q16633 256 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 AARDQ4LEZ3 155 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 DHRS7BQ6IAN0 325 aaPredicted RBP11.54□□□□□ -0.56
CUX1-209ENST00000487284 BAP18Q8IXM2 172 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 TMEM252Q8N6L7 170 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 MAPK1IP1LQ8NDC0 245 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 TMEM186Q96B77 213 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 BSCL2Q96G97 398 aaPredicted RBP11.54□□□□□ -0.56
CUX1-209ENST00000487284 REG4Q9BYZ8 158 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 LPAR2Q9HBW0 351 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 WSB1Q9Y6I7 421 aa11.54□□□□□ -0.56
CUX1-209ENST00000487284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.53□□□□□ -0.56
CUX1-209ENST00000487284 LINC00862A6NCI5 91 aa11.53□□□□□ -0.56
CUX1-209ENST00000487284 CRYZL1O95825 349 aa11.53□□□□□ -0.56
CUX1-209ENST00000487284 TAS2R30P59541 319 aa11.53□□□□□ -0.56
CUX1-209ENST00000487284 ERVK-16P61578 105 aa11.53□□□□□ -0.56
CUX1-209ENST00000487284 RPL23AP62750 156 aaKnown RBP11.53□□□□□ -0.56
CUX1-209ENST00000487284 LOXL1Q08397 574 aaPredicted RBP11.53□□□□□ -0.56
CUX1-209ENST00000487284 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
CUX1-209ENST00000487284 ABHD12Q8N2K0 398 aa11.53□□□□□ -0.56
CUX1-209ENST00000487284 OR10X1Q8NGY0 326 aa11.53□□□□□ -0.56
CUX1-209ENST00000487284 SMIM8Q96KF7 97 aa11.53□□□□□ -0.56
CUX1-209ENST00000487284 MRPL20Q9BYC9 149 aaKnown RBP11.53□□□□□ -0.56
CUX1-209ENST00000487284 IGHV2-26A0A0B4J1V2 119 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 hCG_1809904A0A1W2PP81 198 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 A0A1W2PPE2 198 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 A0A1W2PR64 198 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 A0A1W2PRV1 198 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 MED6O75586 246 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 FOXH1O75593 365 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 JTBO76095 146 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 IGLV1-47P01700 117 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 NMBP08949 121 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 TAGLNQ01995 201 aaKnown RBP11.52□□□□□ -0.57
CUX1-209ENST00000487284 NHLH2Q02577 135 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 PAX2Q02962 417 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 BAXQ07812 192 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 RTL8BQ17RB0 113 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 SMIM3Q9BZL3 60 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 MMP26Q9NRE1 261 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 SLC35D1Q9NTN3 355 aa11.52□□□□□ -0.57
CUX1-209ENST00000487284 TXNL1O43396 289 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 RRASP10301 218 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 IL3RAP26951 378 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 UBE2KP61086 200 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 CLEC9AQ6UXN8 241 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 UBAC2Q8NBM4 344 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 BEND2Q8NDZ0 799 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 OR5AN1Q8NGI8 311 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 ARV1Q9H2C2 271 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 SLC25A32Q9H2D1 315 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 RBKSQ9H477 322 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 WFDC1Q9HC57 220 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 OTOGQ6ZRI0 2925 aa11.51□□□□□ -0.57
CUX1-209ENST00000487284 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 IGHV2-70DA0A0C4DH43 119 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 H0YJW9 148 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 M0R1W7 72 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 ENSAO43768 121 aaKnown RBP11.5□□□□□ -0.57
CUX1-209ENST00000487284 HRASP01112 189 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 APOA2P02652 100 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 IAPPP10997 89 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 PRRX1P54821 245 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 HLA-DRB5Q30154 266 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 SSX9Q7RTT3 188 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 Q8N7P7 452 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 PCNPQ8WW12 178 aaKnown RBP11.5□□□□□ -0.57
CUX1-209ENST00000487284 RHOVQ96L33 236 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 NABP2Q9BQ15 211 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 PCGF1Q9BSM1 259 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 ONECUT1Q9UBC0 465 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
CUX1-209ENST00000487284 AUP1Q9Y679 476 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 SVEP1Q4LDE5 3571 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 ARF6P62330 175 aa11.5□□□□□ -0.57
CUX1-209ENST00000487284 RELBQ01201 579 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms