RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RAB7AP51149 207 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 SPCS3P61009 180 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 ERVK-16P61578 105 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 FAM27E3Q08E93 113 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 C17orf58Q2M2W7 97 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 FAM201AQ5SY85 155 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 ZNF343Q6P1L6 599 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 ZNF709Q8N972 641 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 OR52E5Q8NH55 327 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 OR4A16Q8NH70 328 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 S1PR3Q99500 378 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 FAM234AQ9H0X4 552 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 SDF2L1Q9HCN8 221 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 GCM1Q9NP62 436 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 IL19Q9UHD0 177 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 SVILO95425 2214 aa14.87□□□□□ -0.03
PDLIM7-207ENST00000486828 IGHV1-46P01743 117 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 IGHV3-7P01780 117 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 SELLP14151 372 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 RPS10P46783 165 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 ERVFRD-1P60508 538 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 TNFAIP6P98066 277 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 SSX9Q7RTT3 188 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 SDSLQ96GA7 329 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 ACTR3CQ9C0K3 210 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 SPENQ96T58 3664 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 DSPP15924 2871 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 PCP4L1A6NKN8 68 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 SLC31A2O15432 143 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 CXCL1P09341 107 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 NQO2P16083 231 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 CD40P25942 277 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 RPP30P78346 268 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 MEF2BQ02080 365 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 FABP9Q0Z7S8 132 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 PDLIM3Q53GG5 364 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 STUMQ69YW2 141 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 C22orf34Q6ZV56 151 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 DDB2Q92466 427 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 TMEM242Q9NWH2 141 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 GFOD1Q9NXC2 390 aa14.86□□□□□ -0.03
PDLIM7-207ENST00000486828 ACACBO00763 2458 aa14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 KBTBD11-OT1A0A1B0GTJ5 212 aa14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 CYB5R3P00387 301 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 S100A8P05109 93 aa14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 CD81P60033 236 aa14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 WDR25Q64LD2 544 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 UNQ6494/PRO21346Q6UXR6 183 aa14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 RAXQ9Y2V3 346 aa14.85□□□□□ -0.03
PDLIM7-207ENST00000486828 AP4M1O00189 453 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 HMGB3O15347 200 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 BMP5P22003 454 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 PSMB3P49720 205 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 RELBQ01201 579 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 C1orf229Q6ZS94 237 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 TMPRSS5Q9H3S3 457 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 MANBALQ9NQG1 85 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 WDR83OSQ9Y284 106 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 URGCP-MRPS24S4R325 110 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 TRGV10A0A0A0MS01 117 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 NDUFS6O75380 124 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 TNFSF4P23510 183 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 CD1BP29016 333 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 VDAC2P45880 294 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 CT45A1Q5HYN5 189 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 UTF1Q5T230 341 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 DUX4L9Q6RFH8 374 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 VKORC1L1Q8N0U8 176 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 Q8N7P7 452 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 OR4S2Q8NH73 311 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 SVIPQ8NHG7 77 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 CT45A3Q8NHU0 189 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 LEAP2Q969E1 77 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 RAB24Q969Q5 203 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 GAFA1Q96PS6 74 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 TMEM140Q9NV12 185 aa14.84□□□□□ -0.03
PDLIM7-207ENST00000486828 TGIF2-C20orf24A0A0A6YYL0 155 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 CYB5BO43169 146 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 CCKARP32238 428 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 RND2P52198 227 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 TLE1Q04724 770 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 ACOT6Q3I5F7 207 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 NUP37Q8NFH4 326 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 DIRC2Q96SL1 478 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 ZNF251Q9BRH9 671 aa14.83□□□□□ -0.04
PDLIM7-207ENST00000486828 PRRC2CQ9Y520 2896 aaKnown RBP14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 TMEM250H0YL14 139 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 CLDN34H7C241 214 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 IFNA10P01566 189 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 S100A12P80511 92 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 GGACTQ9BVM4 153 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 HEYLQ9NQ87 328 aaPredicted RBP14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 NAT8Q9UHE5 227 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 DOCK11Q5JSL3 2073 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 SAA2-SAA4A0A096LPE2 208 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 TRAV3A0A0B4J244 114 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 MKRN2OSH3BPM6 223 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 SOX15O60248 233 aa14.82□□□□□ -0.04
PDLIM7-207ENST00000486828 SAA2P0DJI9 122 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms