RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 AP1S3Q96PC3 154 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 EIF5A2Q9GZV4 153 aaKnown RBP4.47□□□□□ -1.69
COPS3-209ENST00000486810 DEFB129Q9H1M3 183 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 SH3BGRL3Q9H299 93 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 SH2D2AQ9NP31 389 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 FGF20Q9NP95 211 aaPredicted RBP4.47□□□□□ -1.69
COPS3-209ENST00000486810 NUDT4Q9NZJ9 180 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 MDFICQ9P1T7 246 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 CLCF1Q9UBD9 225 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 LHX3Q9UBR4 397 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 KLK11Q9UBX7 282 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 PRNDQ9UKY0 176 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 RARRES3Q9UL19 164 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 TP53TG1Q9Y2A0 90 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 MED31Q9Y3C7 131 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 YTHDF2Q9Y5A9 579 aaKnown RBP4.47□□□□□ -1.69
COPS3-209ENST00000486810 SOX21Q9Y651 276 aaPredicted RBP4.47□□□□□ -1.69
COPS3-209ENST00000486810 CD163L1Q9NR16 1453 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 RREB1Q92766 1687 aa4.47□□□□□ -1.69
COPS3-209ENST00000486810 FAM208AQ9UK61 1670 aaKnown RBP4.47□□□□□ -1.69
COPS3-209ENST00000486810 SLIT2O94813 1529 aa4.46□□□□□ -1.69
COPS3-209ENST00000486810 NHSL1Q5SYE7 1610 aa4.46□□□□□ -1.69
COPS3-209ENST00000486810 COL14A1Q05707 1796 aaKnown RBP4.46□□□□□ -1.7
COPS3-209ENST00000486810 TRAV9-2A0A087WT02 112 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 SAA2-SAA4A0A096LPE2 208 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ZNF816-ZNF321PA0A0X1KG74 233 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 FAM231BA6NCW3 169 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 FAM220BPB1ANY3 271 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 H3BMH7 237 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 OR2H2O95918 312 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 TNFP01375 233 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ATP1B1P05026 303 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 CSN3P07498 182 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 IL3P08700 152 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 SRP19P09132 144 aaKnown RBP4.46□□□□□ -1.7
COPS3-209ENST00000486810 NTF3P20783 257 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 CDAP32320 146 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 OPRM1P35372 400 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 PPICP45877 212 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 GZMMP51124 257 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 CCL11P51671 97 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
COPS3-209ENST00000486810 SSBP1Q04837 148 aaKnown RBP4.46□□□□□ -1.7
COPS3-209ENST00000486810 ZNF146Q15072 292 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 Q6AWC8 147 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 SFXN4Q6P4A7 337 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ZNF880Q6PDB4 577 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 Q6ZRG5 221 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 Q6ZT83 130 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 Q6ZUT4 128 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ZNF441Q8N8Z8 693 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 VN1R2Q8NFZ6 395 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 OR2M3Q8NG83 312 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 OR10P1Q8NGE3 313 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 OR51A4Q8NGJ6 313 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 CMTM2Q8TAZ6 248 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ACER1Q8TDN7 264 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 LRRC15Q8TF66 581 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 MCHR1Q99705 422 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 RASL11BQ9BPW5 248 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 PMCHL2Q9BQD1 86 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 NMES1Q9C002 83 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 OR2H1Q9GZK4 316 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 REEP1Q9H902 201 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ZNF581Q9P0T4 197 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ABT1Q9ULW3 272 aaKnown RBP4.46□□□□□ -1.7
COPS3-209ENST00000486810 WASHC3Q9Y3C0 194 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 LSM5Q9Y4Y9 91 aaKnown RBP4.46□□□□□ -1.7
COPS3-209ENST00000486810 SCN5AQ14524 2016 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 ALPK3Q96L96 1907 aa4.46□□□□□ -1.7
COPS3-209ENST00000486810 A0A087WYN8 130 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 ARRDC5A6NEK1 342 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 ZNF850A8MQ14 1090 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 USP17L23D6RBM5 183 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 FNDC10F2Z333 226 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 C17orf112F2Z3M2 114 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 CCDC179H3BU77 68 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 TBL1XO60907 577 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 GPX1P07203 203 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 H1F0P07305 194 aaKnown RBP4.45□□□□□ -1.7
COPS3-209ENST00000486810 CT62P0C5K7 136 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 IRF1P10914 325 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 CD58P19256 250 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 PRDX3P30048 256 aaKnown RBP4.45□□□□□ -1.7
COPS3-209ENST00000486810 GRPRP30550 384 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 ZFP36L2P47974 494 aaKnown RBP4.45□□□□□ -1.7
COPS3-209ENST00000486810 SGSHP51688 502 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 TMEM50BP56557 158 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 RPS15AP62244 130 aaKnown RBP4.45□□□□□ -1.7
COPS3-209ENST00000486810 FAM53BQ14153 422 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 TAL2Q16559 108 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 LINC01620Q4KN68 170 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 TECRLQ5HYJ1 363 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 MEIG1Q5JSS6 88 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 PAGE3Q5JUK9 113 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 ZNF684Q5T5D7 378 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 LYSMD4Q5XG99 296 aa4.45□□□□□ -1.7
COPS3-209ENST00000486810 PMS2CLQ68D20 193 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms