RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 ZNF253O75346 499 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 CD82P27701 267 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 CATR1Q13166 79 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 SLC25A53Q5H9E4 307 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 LRTM2Q8N967 370 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 ANAPC16Q96DE5 110 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 ARFGEF3Q5TH69 2177 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 DIRC3C9JPN6 131 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 MT-CO3P00414 261 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 NBL1P41271 181 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 SOX8P57073 446 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 OR1L6Q8NGR2 347 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 ENY2Q9NPA8 101 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 ATP23Q9Y6H3 246 aa10.45□□□□□ -0.74
SHROOM3-208ENST00000486758 ADGRG4Q8IZF6 3080 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 hCG_38984A0A1B0GV85 526 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 AESQ08117 197 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 TRA2AQ13595 282 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 FXYD3Q14802 87 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 ACSM6Q6P461 480 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 TMEM170AQ8WVE7 144 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 TMEM56Q96MV1 263 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 RTL8AQ9BWD3 113 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 LNP1A1A4G5 178 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 CA11O75493 328 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 CELA3BP08861 270 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 RAB4AP20338 218 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 MMDQ15546 238 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 TDRG1Q3Y452 100 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 FER1L6-AS2Q96M78 137 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 DIRC2Q96SL1 478 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 P2RX4Q99571 388 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 POLR3KQ9Y2Y1 108 aaPredicted RBP10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 ZNF716A6NP11 495 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 OR7C2O60412 319 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 SERF1AO75920 110 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 ARR3P36575 388 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 LINC00205P59089 165 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 NMSQ5H8A3 153 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 CRIM1Q9NZV1 1036 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 ZNF462Q96JM2 2506 aa10.44□□□□□ -0.74
SHROOM3-208ENST00000486758 DLEU1O43261 78 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 CHRNB4P30926 498 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 ADMP35318 185 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 RAB7AP51149 207 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 ZNF766Q5HY98 468 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 CISD2Q8N5K1 135 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 OR8G5Q8NG78 346 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 OR4C5Q8NGB2 326 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 OR4A16Q8NH70 328 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 ABHD14BQ96IU4 210 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 ZPBPQ9BS86 351 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 KLF13Q9Y2Y9 288 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 ZGRF1Q86YA3 2104 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 TMEM131Q92545 1883 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 LRP5LA4QPB2 252 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 PAX9P55771 341 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 OR8B8Q15620 311 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 LRRC75BQ2VPJ9 315 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 GGNQ86UU5 652 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 OR8I2Q8N0Y5 310 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 FAM19A2Q8N3H0 131 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 PROK2Q9HC23 129 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 PSG11Q9UQ72 335 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 CPAMD8Q8IZJ3 1885 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 TDGF1P3P51864 188 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 UCP2P55851 309 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 DEFB109BQ30KR1 87 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 ZCCHC14Q8WYQ9 949 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 C10orf35Q96D05 121 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 MRPL18Q9H0U6 180 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 INTS1Q8N201 2190 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 SPG11Q96JI7 2443 aa10.43□□□□□ -0.74
SHROOM3-208ENST00000486758 SPAARA0A1B0GVQ0 90 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 A0A1B0GW64 132 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 B4E171 279 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 WNT9BO14905 357 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 IGKV1D-33P01593 117 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 IGKV1-33P01594 117 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 OTX1P32242 354 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 C20orf204Q6ZNR8 217 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 Q6ZVH6 145 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 SLC25A40Q8TBP6 338 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 NKX2-8O15522 239 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 FCGR3BO75015 233 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 PFN1P07737 140 aaKnown RBP10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 FGF12P61328 243 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 COL5A1-AS1Q5SY13 56 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 FAM53AQ6NSI3 398 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 VKORC1L1Q8N0U8 176 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 NHLRC2Q8NBF2 726 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 RNF212BA8MTL3 300 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 SH2D1BO14796 132 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 NUPR1O60356 82 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 RAMP3O60896 148 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms