RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 NOTCH1P46531 2555 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 SOX15O60248 233 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 CREBL2O60519 120 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-207ENST00000486572 SAA1P0DJI8 122 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-207ENST00000486572 GNRHRP30968 328 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 BRWD1-AS2P59051 145 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 TSPAN5P62079 268 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 ETV3LQ6ZN32 361 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 IDO2Q6ZQW0 420 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 LFNGQ8NES3 379 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 FCAMRQ8WWV6 532 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 FXYD6Q9H0Q3 95 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 RBM38Q9H0Z9 239 aaKnown RBP14.21□□□□□ -0.13
COL1A1-207ENST00000486572 MTFP1Q9UDX5 166 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 PLXNB1O43157 2135 aa14.21□□□□□ -0.13
COL1A1-207ENST00000486572 RBFOX2O43251 390 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL1A1-207ENST00000486572 CD33P20138 364 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 MRPS10P82664 201 aaKnown RBP14.2□□□□□ -0.14
COL1A1-207ENST00000486572 PRSS8Q16651 343 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 MRGPRG-AS1Q2M3A8 158 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 VAX1Q5SQQ9 334 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 AADACL3Q5VUY0 350 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 PYHIN1Q6K0P9 492 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 SPAG16Q8N0X2 631 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 WFDC9Q8NEX5 89 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 OR5M8Q8NGP6 311 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 MCFD2Q8NI22 146 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 C4orf3Q8WVX3 66 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 DIRAS2Q96HU8 199 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 KLK15Q9H2R5 256 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 RABL2AQ9UBK7 228 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-207ENST00000486572 RABL2BQ9UNT1 228 aa14.2□□□□□ -0.14
COL1A1-207ENST00000486572 GABARAPH6UMI1 98 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 M0QYG6 137 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 TBPP20226 339 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 RAB9AP51151 201 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 TNXAQ16473 311 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 RNASE10Q5GAN6 216 aaKnown RBP14.19□□□□□ -0.14
COL1A1-207ENST00000486572 CMTM1Q8IZ96 169 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 VKORC1L1Q8N0U8 176 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 LINC00482Q8N8I6 264 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 OR51H1Q8NH63 302 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 VSTM2AQ8TAG5 236 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 UBE2E2Q96LR5 201 aa14.19□□□□□ -0.14
COL1A1-207ENST00000486572 ZNF430Q9H8G1 570 aaPredicted RBP14.19□□□□□ -0.14
COL1A1-207ENST00000486572 RSL24D1Q9UHA3 163 aaKnown RBP14.19□□□□□ -0.14
COL1A1-207ENST00000486572 G3V4G9 280 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 RAMP3O60896 148 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 HRASP01112 189 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 RLN1P04808 185 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 CD40LGP29965 261 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 MYCNOSP40205 109 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 DGCR2P98153 550 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 IL18Q14116 193 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 SAMD5Q5TGI4 173 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 C1QL4Q86Z23 238 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 MRPL41Q8IXM3 137 aaKnown RBP14.18□□□□□ -0.14
COL1A1-207ENST00000486572 MMD2Q8IY49 270 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 ZNF491Q8N8L2 437 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 POC5Q8NA72 575 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 CD300LFQ8TDQ1 290 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 SMIM4Q8WVI0 70 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 RAX2Q96IS3 184 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 RHOVQ96L33 236 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 NXF2Q9GZY0 626 aaKnown RBP14.18□□□□□ -0.14
COL1A1-207ENST00000486572 VSIG4Q9Y279 399 aa14.18□□□□□ -0.14
COL1A1-207ENST00000486572 ZNF701M0R085 212 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-207ENST00000486572 GPR31O00270 319 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 ACTL6BO94805 426 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 KBTBD11O94819 623 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 OR2A4O95047 310 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 CD3DP04234 171 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 IFNA6P05013 189 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 SSBP1Q04837 148 aaKnown RBP14.17□□□□□ -0.14
COL1A1-207ENST00000486572 KIAA0141Q14154 515 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-207ENST00000486572 DEFB136Q30KP8 78 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 LPCAT3Q6P1A2 487 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 PUSL1Q8N0Z8 303 aaKnown RBP14.17□□□□□ -0.14
COL1A1-207ENST00000486572 ARRDC1Q8N5I2 433 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 CASTOR1Q8WTX7 329 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 SRSF12Q8WXF0 261 aaKnown RBP14.17□□□□□ -0.14
COL1A1-207ENST00000486572 TMEM68Q96MH6 324 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 DUX3Q96PT4 197 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 OR2A7Q96R45 310 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 P2RX4Q99571 388 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 PHB2Q99623 299 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 AIFM2Q9BRQ8 373 aa14.17□□□□□ -0.14
COL1A1-207ENST00000486572 TINAGL1Q9GZM7 467 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-207ENST00000486572 CCL24O00175 119 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 CTDSPLO15194 276 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 PGLYRP1O75594 196 aaPredicted RBP14.16□□□□□ -0.14
COL1A1-207ENST00000486572 HPRT1P00492 218 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 TAS2R31P59538 309 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 TAS2R19P59542 299 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 DEFA6Q01524 100 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 TMEM229BQ8NBD8 167 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 TMEM167AQ8TBQ9 72 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 SLA2Q9H6Q3 261 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 GNB4Q9HAV0 340 aa14.16□□□□□ -0.14
COL1A1-207ENST00000486572 CMYA5Q8N3K9 4069 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms