RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 MTCH1Q9NZJ7 389 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 A0A096LNT2 108 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 IGHV2OR16-5A0A0B4J2B6 119 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 hCG_1809904A0A1W2PP81 198 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 A0A1W2PPE2 198 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 A0A1W2PR64 198 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 A0A1W2PRV1 198 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 VSTM5A8MXK1 200 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 SEC14L6B5MCN3 397 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 B9A039 149 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 CST7O76096 145 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 HLA-HP01893 362 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 OPN1MWP04001 364 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 OPN1MW2P0DN77 364 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 OPN1MW3P0DN78 364 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 EPHA1P21709 976 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 AKR1C3P42330 323 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 GLIPR1P48060 266 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 FHITP49789 147 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 PDLIM4P50479 330 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 LOXL1Q08397 574 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF154Q13106 437 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 ICAM4Q14773 271 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 HAGHQ16775 308 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF674Q2M3X9 581 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 TMEM41BQ5BJD5 291 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 THNSL2Q86YJ6 484 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 TMEM217Q8N7C4 229 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 NUP37Q8NFH4 326 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 OR51H1Q8NH63 302 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 GPR146Q96CH1 333 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF581Q9P0T4 197 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 TAAR3PQ9P1P4 343 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 VAX2Q9UIW0 290 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 TRAPPC2LQ9UL33 140 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 KCNS2Q9ULS6 477 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 YLPM1P49750 1951 aaKnown RBP7.5□□□□□ -1.21
COL12A1-208ENST00000486533 IGKV1D-13A0A0B4J2D9 117 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 TMEM30CPA0ZSE6 113 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-208ENST00000486533 CLDN34H7C241 214 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 CYB5R3P00387 301 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-208ENST00000486533 IGKV1-13P0DP09 117 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 USF1P22415 310 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-208ENST00000486533 DLK1P80370 383 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 HERPUD1Q15011 391 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 PDCD1Q15116 288 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 EFNB3Q15768 340 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 C1orf174Q8IYL3 243 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 NANPQ8TBE9 248 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 PLPPR1Q8TBJ4 325 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 ISOC2Q96AB3 205 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 MDFIQ99750 246 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 PIMREGQ9BSJ6 248 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 BCL2L14Q9BZR8 327 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 TOLLIPQ9H0E2 274 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 OR51I2Q9H344 312 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 DYNLRB1Q9NP97 96 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 MANBALQ9NQG1 85 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 NIT2Q9NQR4 276 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 CACNG5Q9UF02 275 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 STAB1Q9NY15 2570 aa7.5□□□□□ -1.21
COL12A1-208ENST00000486533 TRAV24A0A0B4J272 114 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 A0A1B0GV50 99 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 C17orf112F2Z3M2 114 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 NDUFS8O00217 210 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 HSPB6O14558 160 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 SYNGR1O43759 233 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF205O95201 554 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 ARG1P05089 322 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 PSG2P11465 335 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF16P17020 682 aaPredicted RBP7.49□□□□□ -1.21
COL12A1-208ENST00000486533 HOXA5P20719 270 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 CDX1P47902 265 aaPredicted RBP7.49□□□□□ -1.21
COL12A1-208ENST00000486533 PPOXP50336 477 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 CEBPGP53567 150 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 RPP30P78346 268 aaKnown RBP7.49□□□□□ -1.21
COL12A1-208ENST00000486533 LRRC75BQ2VPJ9 315 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF497Q6ZNH5 498 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 Q6ZPA2 131 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 CYB561D1Q8N8Q1 229 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 RDH5Q92781 318 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 CYYR1Q96J86 154 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 RARRES2Q99969 163 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 RAB1BQ9H0U4 201 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 RAB9BQ9NP90 201 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 GAR1Q9NY12 217 aaKnown RBP7.49□□□□□ -1.21
COL12A1-208ENST00000486533 WIPI2Q9Y4P8 454 aa7.49□□□□□ -1.21
COL12A1-208ENST00000486533 MALRD1Q5VYJ5 2156 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 IGKV1-6A0A0C4DH72 117 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 OOEPA6NGQ2 149 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 PPIHO43447 177 aaKnown RBP7.48□□□□□ -1.21
COL12A1-208ENST00000486533 NXPH2O95156 264 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 DAOP14920 347 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 NQO2P16083 231 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 PSMB3P49720 205 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 RND2P52198 227 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 PAX9P55771 341 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms