RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 RBP4P02753 201 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 IGHV1-8P0DP01 117 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 CAV2P51636 162 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 LINC00205P59089 165 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 ERVFRD-1P60508 538 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 KRTAP1-1Q07627 177 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 MIDNQ504T8 468 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 FAM71F2Q6NXP2 309 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 C1orf229Q6ZS94 237 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 OR9G1Q8NH87 305 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 SLC25A32Q9H2D1 315 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 PATZ1Q9HBE1 687 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 WSB1Q9Y6I7 421 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 SESN1Q9Y6P5 492 aa11.91□□□□□ -0.5
POLR2J3-204ENST00000486319 TLN2Q9Y4G6 2542 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 HIVEP2P31629 2446 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 PPIAL4CA0A0B4J2A2 164 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 hCG_1809904A0A1W2PP81 198 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A1W2PPE2 198 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A1W2PR64 198 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 A0A1W2PRV1 198 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 LINC00862A6NCI5 91 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 J3QR06 171 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 CD5LO43866 347 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 PPIAL4GP0DN37 164 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 NQO2P16083 231 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 GPR6P46095 362 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 ERVK-16P61578 105 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 GNB2P62879 340 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 BAXQ07812 192 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 ZNF833PQ6ZTB9 187 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 TNFRSF14Q92956 283 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 TMEM186Q96B77 213 aa11.9□□□□□ -0.5
POLR2J3-204ENST00000486319 C2CD3Q4AC94 2353 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 MALRD1Q5VYJ5 2156 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 FAM24AA6NFZ4 105 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 S100A1P23297 94 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 TAS2R30P59541 319 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 TAGLNQ01995 201 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 C11orf42Q8N5U0 333 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 TMEM252Q8N6L7 170 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 OR10X1Q8NGY0 326 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 TMEM133Q9H2Q1 129 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 HSPB7Q9UBY9 170 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 CACFD1Q9UGQ2 172 aa11.89□□□□□ -0.51
POLR2J3-204ENST00000486319 NF1P21359 2839 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 BORCS7-ASMTA0A0B4J1R7 106 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 INAFM1C9JVW0 142 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 LIPFP07098 398 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 RRASP10301 218 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 IL3RAP26951 378 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 PAX9P55771 341 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 UBE2KP61086 200 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 NHLH2Q02577 135 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 RTL8BQ17RB0 113 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 CYB5R2Q6BCY4 276 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 RPL7L1Q6DKI1 246 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 DHRS7BQ6IAN0 325 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 ABHD12Q8N2K0 398 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 LRRC20Q8TCA0 184 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 YAE1D1Q9NRH1 226 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 ABCA1O95477 2261 aa11.88□□□□□ -0.51
POLR2J3-204ENST00000486319 IGSF23A1L1A6 192 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 TMEM50AO95807 157 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 HOXB4P17483 251 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 ZNF137PP52743 207 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 STX12Q86Y82 276 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 PDZD9Q8IXQ8 264 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 AIFM2Q9BRQ8 373 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 SSBP3Q9BWW4 388 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 SLC35D1Q9NTN3 355 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
POLR2J3-204ENST00000486319 TXNL1O43396 289 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 RBMXL2O75526 392 aaKnown RBP11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 CRYZL1O95825 349 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 HRASP01112 189 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 APOA2P02652 100 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 NMBP08949 121 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 PRRX1P54821 245 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 OR4A16Q8NH70 328 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 RBKSQ9H477 322 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 ZNRD1Q9P1U0 126 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 LY86O95711 162 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 IAPPP10997 89 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 SULT1A1P50225 295 aa11.86□□□□□ -0.51
POLR2J3-204ENST00000486319 ZNF266Q14584 549 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms