RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ZNF257Q9Y2Q1 563 aa9.81□□□□□ -0.84
PKP4-213ENST00000486254 HIVEP3Q5T1R4 2406 aa9.81□□□□□ -0.84
PKP4-213ENST00000486254 CHD8Q9HCK8 2581 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 NBASA2RRP1 2371 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 DVL1O14640 695 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 PLAUP00749 431 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 IGHV2-70P01814 119 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 OR9G9P0C7N8 305 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 ADCYAP1P18509 176 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 NFYBP25208 207 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 GRNP28799 593 aaKnown RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 PMS2P11Q13670 270 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 C4orf17Q53FE4 359 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 SLC25A24Q6NUK1 477 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 DTX2Q86UW9 622 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 OR10P1Q8NGE3 313 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 C8orf46Q8TAG6 207 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 SUN5Q8TC36 379 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 TMEM186Q96B77 213 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 RHOVQ96L33 236 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 PCGF1Q9BSM1 259 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 RAB1BQ9H0U4 201 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 KPTNQ9Y664 436 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 ABCA4P78363 2273 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 A0A1W2PPH5 198 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 MEX3AA1L020 520 aaKnown RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 CEBPZOSA8MTT3 80 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 NDUFS6O75380 124 aaKnown RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 MMP23AO75900 390 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 SNAPINO95295 136 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 MDKP21741 143 aaPredicted RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 VDAC2P45880 294 aaPredicted RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 RAB2AP61019 212 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 C11orf71Q6IPW1 123 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 C1orf229Q6ZS94 237 aaPredicted RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 OR5AN1Q8NGI8 311 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 NEU4Q8WWR8 484 aaPredicted RBP9.8□□□□□ -0.84
PKP4-213ENST00000486254 TAF15Q92804 592 aaKnown RBP eCLIP9.8□□□□□ -0.84
PKP4-213ENST00000486254 TREM1Q9NP99 234 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 BET1LQ9NYM9 111 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 PRNDQ9UKY0 176 aa9.8□□□□□ -0.84
PKP4-213ENST00000486254 C15orf62A8K5M9 175 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 FNDC10F2Z333 226 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 F8W036 122 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 MPDU1O75352 247 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 RBMXL2O75526 392 aaKnown RBP9.79□□□□□ -0.84
PKP4-213ENST00000486254 C1QL1O75973 258 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 GOSR1O95249 250 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 APOA2P02652 100 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 H2AFB1P0C5Y9 115 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 CT45A6P0DMU7 189 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 CT45A5P0DMU8 189 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 CT45A7P0DMV0 189 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 SRSF3P84103 164 aaKnown RBP9.79□□□□□ -0.84
PKP4-213ENST00000486254 RUNX1Q01196 453 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 CDSNQ15517 529 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 GUK1Q16774 197 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 OR4A47Q6IF82 309 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 SPSB3Q6PJ21 355 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 LYPD2Q6UXB3 125 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 THNSL2Q86YJ6 484 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 OR9G1Q8NH87 305 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 MBD3L1Q8WWY6 194 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 ST6GALNAC6Q969X2 333 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
PKP4-213ENST00000486254 FKBP11Q9NYL4 201 aa9.79□□□□□ -0.84
PKP4-213ENST00000486254 RALYQ9UKM9 306 aaKnown RBP9.79□□□□□ -0.84
PKP4-213ENST00000486254 TPRP12270 2363 aaKnown RBP9.79□□□□□ -0.84
PKP4-213ENST00000486254 DOCK11Q5JSL3 2073 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 YLPM1P49750 1951 aaKnown RBP9.78□□□□□ -0.84
PKP4-213ENST00000486254 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 J3QR06 171 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 MBP02144 154 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 IL3RAP26951 378 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 FHITP49789 147 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 LINC00205P59089 165 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 HSPE1P61604 102 aaKnown RBP9.78□□□□□ -0.84
PKP4-213ENST00000486254 TMEM177Q53S58 311 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 UTF1Q5T230 341 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 PDPNQ86YL7 162 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 OR4A5Q8NH83 315 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 LEAP2Q969E1 77 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 NKX6-2Q9C056 277 aaPredicted RBP9.78□□□□□ -0.84
PKP4-213ENST00000486254 UNKLQ9H9P5 680 aaKnown RBP9.78□□□□□ -0.84
PKP4-213ENST00000486254 SLC35D1Q9NTN3 355 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 TCF19Q9Y242 345 aa9.78□□□□□ -0.84
PKP4-213ENST00000486254 SCO1O75880 301 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 IFNA17P01571 189 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 SFTA3P0C7M3 94 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 IGHV1-8P0DP01 117 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 CCL3L1P16619 93 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 GNG10P50151 68 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 RAB13P51153 203 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 DLK1P80370 383 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 LY6DQ14210 128 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 TMEM41BQ5BJD5 291 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms