RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CXCL2P19875 107 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 NKX2-1P43699 371 aaPredicted RBP11.65□□□□□ -0.55
COL9A1-207ENST00000486080 UBE2E1P51965 193 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 MIDNQ504T8 468 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 PRSS54Q6PEW0 395 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 MOB3BQ86TA1 216 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 ZNF546Q86UE3 836 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 DYNAPQ8N1N2 210 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 RITA1Q96K30 269 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 NSG2Q9Y328 171 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 HSPB11Q9Y547 144 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 CELSR1Q9NYQ6 3014 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 TRAV3A0A0B4J244 114 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 CENPVL3A0A0U1RRI6 287 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 A0A1W2PPI3 338 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 ST8SIA3O43173 380 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 DEDDO75618 318 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 RRASP10301 218 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL9A1-207ENST00000486080 TAGLNQ01995 201 aaKnown RBP11.64□□□□□ -0.55
COL9A1-207ENST00000486080 ID3Q02535 119 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 DHRS7BQ6IAN0 325 aaPredicted RBP11.64□□□□□ -0.55
COL9A1-207ENST00000486080 LINC01356Q8N9X3 169 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 WFDC11Q8NEX6 87 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 RHOVQ96L33 236 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
COL9A1-207ENST00000486080 WASHC3Q9Y3C0 194 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 POMT1Q9Y6A1 747 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 AKAP9Q99996 3911 aa11.64□□□□□ -0.55
COL9A1-207ENST00000486080 IGHV3OR16-10A0A075B7F0 116 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 LYL1P12980 280 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 ERVK-16P61578 105 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 SSX2Q16385 188 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 TMEM177Q53S58 311 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 OR4A47Q6IF82 309 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 TMEM65Q6PI78 240 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 DCUN1D4Q92564 292 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
COL9A1-207ENST00000486080 AJUBAQ96IF1 538 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 TNFSF18Q9UNG2 199 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 AUP1Q9Y679 476 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 TNCP24821 2201 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 TRAV20A0A0B4J274 112 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 TIMM23O14925 209 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 SHOXO15266 292 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 TXNL1O43396 289 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 HRASP01112 189 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 MC5RP33032 325 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 CEACAM3P40198 252 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 AP2S1P53680 142 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-207ENST00000486080 LGALS4P56470 323 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 OR2B8PP59922 312 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 PDPNQ86YL7 162 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 C7orf69Q9H7B7 122 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 COA4Q9NYJ1 87 aa11.63□□□□□ -0.55
COL9A1-207ENST00000486080 CREBBPQ92793 2442 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 SSSCA1O60232 199 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 RLN2P04090 185 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 PET100P0DJ07 73 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 IGHV4-31P0DP07 118 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 SAA4P35542 130 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 RPS16P62249 146 aaKnown RBP11.62□□□□□ -0.55
COL9A1-207ENST00000486080 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 MINOS1Q5TGZ0 78 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 OR4C13Q8NGP0 309 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 OSR1Q8TAX0 266 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-207ENST00000486080 HARBI1Q96MB7 349 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 MFFQ9GZY8 342 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-207ENST00000486080 MINOS1-NBL1R4GNA1 71 aa11.62□□□□□ -0.55
COL9A1-207ENST00000486080 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 MSGN1A6NI15 193 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 NPFFO15130 113 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 RBMXL2O75526 392 aaKnown RBP11.61□□□□□ -0.55
COL9A1-207ENST00000486080 TGFAP01135 160 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 AVPP01185 164 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 RAB13P51153 203 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 RELBQ01201 579 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 TMEM249Q2WGJ8 235 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 RUSC1-AS1Q66K80 236 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 CFHR4Q92496 578 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 QTRT1Q9BXR0 403 aaKnown RBP11.61□□□□□ -0.55
COL9A1-207ENST00000486080 MS4A7Q9GZW8 240 aaPredicted RBP11.61□□□□□ -0.55
COL9A1-207ENST00000486080 C11orf1Q9H5F2 150 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 TEX15Q9BXT5 2789 aa11.61□□□□□ -0.55
COL9A1-207ENST00000486080 TRAV40A0A0B4J280 105 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 L7N2F9 121 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 CHST1O43916 411 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 TMEM50AO95807 157 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 IGLV2-23P01705 113 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 SAA1P0DJI8 122 aaPredicted RBP11.6□□□□□ -0.55
COL9A1-207ENST00000486080 IGHV4-38-2P0DP08 117 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 CD24P25063 80 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 ZFP57Q9NU63 452 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 TBL2Q9Y4P3 447 aaKnown RBP11.6□□□□□ -0.55
COL9A1-207ENST00000486080 ABCA1O95477 2261 aa11.6□□□□□ -0.55
COL9A1-207ENST00000486080 IGHV1-69DA0A0B4J2H0 117 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms