RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 TAMM41Q96BW9 452 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 TPD52L3Q96J77 140 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 AKR1E2Q96JD6 320 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 PGLYRP4Q96LB8 373 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 KCTD7Q96MP8 289 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 C18orf15Q96N68 181 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 SORT1Q99523 831 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 HDHD2Q9H0R4 259 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 DNTTIP1Q9H147 329 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 VCX2Q9H322 139 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 ARMC7Q9H6L4 198 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 TUBA4BQ9H853 241 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 MRPL22Q9NWU5 206 aaKnown RBP2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 RDH8Q9NYR8 311 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 APLNQ9ULZ1 77 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 POLR1DQ9Y2S0 133 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 MINOS1-NBL1R4GNA1 71 aa2.51□□□□□ -2.01
SMARCC1-207ENST00000485833 GMNCA6NCL1 334 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 SMIM23A6NLE4 172 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 FAM25EA8MYX2 175 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 ZNF736B4DX44 427 aaPredicted RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 C5orf58C9J3I9 102 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 SDHDO14521 159 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 ZNF737O75373 536 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 IGKV1D-33P01593 117 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 IGKV1-33P01594 117 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 IGHV3-11P01762 117 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 TROVE2P10155 538 aaKnown RBP eCLIP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 IFI30P13284 250 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 HTR1DP28221 377 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 OTX1P32242 354 aaPredicted RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 NAA10P41227 235 aaPredicted RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 GPR4P46093 362 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 OR1E2P47887 323 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 GPM6AP51674 278 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 EDDM3BP56851 147 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 SLC35B1P78383 322 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 RUNX1Q01196 453 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 DEFA5Q01523 94 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 CAV1Q03135 178 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 RAB40BQ12829 278 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 PRDX4Q13162 271 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 EDDM3AQ14507 147 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 CCDC153Q494R4 210 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 REEP3Q6NUK4 255 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 TBPL2Q6SJ96 375 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 OR10Z1Q8NGY1 313 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 ACMSDQ8TDX5 336 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 TMEM239Q8WW34 195 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 CHCHD10Q8WYQ3 142 aaPredicted RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 OR5P3Q8WZ94 311 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 AQP3Q92482 292 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 GTF2H4Q92759 462 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 SGK3Q96BR1 496 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 C4orf36Q96KX1 117 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 SLC22A4Q9H015 551 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 TOLLIPQ9H0E2 274 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 TMEM133Q9H2Q1 129 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 OR51I2Q9H344 312 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 WDR55Q9H6Y2 383 aaPredicted RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 CACYBPQ9HB71 228 aaKnown RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 VAPAQ9P0L0 249 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 PSMC3IPQ9P2W1 217 aaPredicted RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 WARS2Q9UGM6 360 aaKnown RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 B9D1Q9UPM9 204 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 UTP11Q9Y3A2 253 aaKnown RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 SAR1BQ9Y6B6 198 aa2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
SMARCC1-207ENST00000485833 IGLV2-18A0A075B6J9 118 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 ARRDC5A6NEK1 342 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 TVP23AA6NH52 213 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 A6NIZ1 184 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 LINC01619G3V211 115 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 BUB1B-PAK6H3BSN5 160 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 BOLA2-SMG1P6H3BVE0 249 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 M0QX08 132 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 COPEO14579 308 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 POLR3GO15318 223 aaPredicted RBP2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 SNNO75324 88 aaPredicted RBP2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 SPAG7O75391 227 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 CD14P08571 375 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 OR8U9P0C7N5 309 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 CRISP2P16562 243 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 CTRB1P17538 263 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 PYCR1P32322 319 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 GUCA1AP43080 201 aaPredicted RBP2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 PTGFRP43088 359 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 TFPI2P48307 235 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 SLC18A1P54219 525 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 ATP5IP56385 69 aaPredicted RBP2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 ACTR3P61158 418 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 RAP1BP61224 184 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 NAA20P61599 178 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 RAP1AP62834 184 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 PITPNAQ00169 270 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 TMED1Q13445 227 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 HES1Q14469 280 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 TATDN3Q17R31 274 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 HLA-DRB5Q30154 266 aa2.49□□□□□ -2.01
SMARCC1-207ENST00000485833 KCTD21Q4G0X4 260 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms