RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 IGLV2-14P01704 120 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 HKR1P10072 659 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 DLX1P56177 255 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 KRTAP21-3Q3LHN1 58 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 Q3ZCU0 254 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 NMSQ5H8A3 153 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 THNSL2Q86YJ6 484 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 FAM219AQ8IW50 185 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 BAP18Q8IXM2 172 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 SPAG16Q8N0X2 631 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 FAM216BQ8N7L0 139 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 OR10A7Q8NGE5 316 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 TAF15Q92804 592 aaKnown RBP eCLIP5.67□□□□□ -1.5
BRCA1-216ENST00000484087 DCTN5Q9BTE1 182 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 ABHD14AQ9BUJ0 271 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 PARP12Q9H0J9 701 aaKnown RBP5.67□□□□□ -1.5
BRCA1-216ENST00000484087 PATZ1Q9HBE1 687 aaKnown RBP5.67□□□□□ -1.5
BRCA1-216ENST00000484087 TMEM160Q9NX00 188 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 GFOD1Q9NXC2 390 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 PRELID3BQ9Y3B1 194 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 LINC00312Q9Y6C7 94 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
BRCA1-216ENST00000484087 ANK2Q01484 3957 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 TENM1Q9UKZ4 2725 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 TRAV20A0A0B4J274 112 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 MDFIC2A0A1B0GVS7 189 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 ANKRD34BA5PLL1 514 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 MSGN1A6NI15 193 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 C22orf46C9J442 243 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 KCNAB3O43448 404 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 SSSCA1O60232 199 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 MED6O75586 246 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 GAPDHP04406 335 aaKnown RBP5.66□□□□□ -1.5
BRCA1-216ENST00000484087 NFYBP25208 207 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 KIR2DS2P43631 304 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 LPAR6P43657 344 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 CAV2P51636 162 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 RPL23AP62750 156 aaKnown RBP5.66□□□□□ -1.5
BRCA1-216ENST00000484087 RPL31P62899 125 aaKnown RBP5.66□□□□□ -1.5
BRCA1-216ENST00000484087 BAXQ07812 192 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 BCL6BQ8N143 479 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-216ENST00000484087 OR2C3Q8N628 320 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-216ENST00000484087 RNF141Q8WVD5 230 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 H1FXQ92522 213 aaKnown RBP5.66□□□□□ -1.5
BRCA1-216ENST00000484087 GPR146Q96CH1 333 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 ADTRPQ96IZ2 230 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 ZNF714Q96N38 554 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 DUX5Q96PT3 197 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 RAB40CQ96S21 281 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 SDHAF2Q9NX18 166 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 COA4Q9NYJ1 87 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 KAAG1Q9UBP8 84 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 GAB2Q9UQC2 676 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 MMP24Q9Y5R2 645 aa5.66□□□□□ -1.5
BRCA1-216ENST00000484087 STAB1Q9NY15 2570 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 A0A1W2PPH5 198 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 RPS10-NUDT3A0A1W2PQS6 291 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 MEX3AA1L020 520 aaKnown RBP5.65□□□□□ -1.5
BRCA1-216ENST00000484087 FAM90A26D6RGX4 464 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 M0R1X1 148 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 TOR1AO14656 332 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 RAB29O14966 203 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 VENTXO95231 258 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 FSTL3O95633 263 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 HPRT1P00492 218 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 CGB3P0DN86 165 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 CGB7P0DN87 165 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 HNF1AP20823 631 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 OMGP23515 440 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 ARHGDIBP52566 201 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 LOXL3P58215 753 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 ERVK-16P61578 105 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 POLR2GP62487 172 aaKnown RBP eCLIP5.65□□□□□ -1.5
BRCA1-216ENST00000484087 GNB2P62879 340 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 ID3Q02535 119 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 ZNF816Q0VGE8 651 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-216ENST00000484087 ZNF266Q14584 549 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 C17orf58Q2M2W7 97 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 TMEM155Q4W5P6 130 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 ZNF585BQ52M93 769 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 KLF17Q5JT82 389 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-216ENST00000484087 BTNL3Q6UXE8 466 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 H2BFWTQ7Z2G1 175 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 COMMD7Q86VX2 200 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 STX12Q86Y82 276 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 S1PR3Q99500 378 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 AGMATQ9BSE5 352 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 SSBP3Q9BWW4 388 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-216ENST00000484087 C7orf69Q9H7B7 122 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 LINC00574Q9H8X3 128 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 LYRM2Q9NU23 88 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-216ENST00000484087 MED9Q9NWA0 146 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 CACNG5Q9UF02 275 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 FBXL17Q9UF56 701 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 CACFD1Q9UGQ2 172 aa5.65□□□□□ -1.5
BRCA1-216ENST00000484087 TRBV23-1A0A0A0MS06 115 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 TRAV40A0A0B4J280 105 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 DVL1O14640 695 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RBFOX2O43251 390 aaKnown RBP eCLIP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms