RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 KIR2DS2P43631 304 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 RTL8BQ17RB0 113 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 LIAT1Q6ZQX7 453 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 UXS1Q8NBZ7 420 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 COQ8AQ8NI60 647 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 RITA1Q96K30 269 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 RBM14Q96PK6 669 aaKnown RBP15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 PHB2Q99623 299 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 OR51J1Q9H342 316 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 RAB18Q9NP72 206 aa15.91■□□□□ 0.14
TRAPPC12-220ENST00000482645 OR2F2O95006 317 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 UCP1P25874 307 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 BRWD1-AS2P59051 145 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 EBI3Q14213 229 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 MMDQ15546 238 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 PDPNQ86YL7 162 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 OR4S2Q8NH73 311 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 LHFPL5Q8TAF8 219 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 GLYATL2Q8WU03 294 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 MITD1Q8WV92 249 aa15.9■□□□□ 0.14
TRAPPC12-220ENST00000482645 S1PR2O95136 353 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 CRYZL1O95825 349 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 CNTFRP26992 372 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 LPAR6P43657 344 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 SRPXP78539 464 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 TMEM268Q5VZI3 342 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 C12orf45Q8N5I9 185 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 FLYWCH2Q96CP2 140 aaKnown RBP15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 MOB4Q9Y3A3 225 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 F2RL1P55085 397 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 RPS16P62249 146 aaKnown RBP15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 TAGLNQ01995 201 aaKnown RBP15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 ZNF585BQ52M93 769 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 ZNF695Q8IW36 515 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 LGI3Q8N145 548 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 Q8N6K4 173 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 TCTEX1D1Q8N7M0 179 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 CD300LFQ8TDQ1 290 aa15.89■□□□□ 0.13
TRAPPC12-220ENST00000482645 ATRQ13535 2644 aa15.88■□□□□ 0.13
TRAPPC12-220ENST00000482645 SH2D7A6NKC9 451 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC12-220ENST00000482645 RRASP10301 218 aa15.88■□□□□ 0.13
TRAPPC12-220ENST00000482645 RIPPLY3P57055 190 aa15.88■□□□□ 0.13
TRAPPC12-220ENST00000482645 C16orf82Q7Z2V1 217 aa15.88■□□□□ 0.13
TRAPPC12-220ENST00000482645 OR4C13Q8NGP0 309 aa15.88■□□□□ 0.13
TRAPPC12-220ENST00000482645 HARBI1Q96MB7 349 aa15.88■□□□□ 0.13
TRAPPC12-220ENST00000482645 SHOXO15266 292 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 RBFOX2O43251 390 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 CDS2O95674 445 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 IGKV1-39P01597 117 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 IGKV1D-39P04432 117 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 SELENOHQ8IZQ5 122 aaKnown RBP15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 SLC35G3Q8N808 338 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 RNASE11Q8TAA1 199 aaKnown RBP15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 RBPMSQ93062 196 aaKnown RBP15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 TMEM56Q96MV1 263 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 NPFFR1Q9GZQ6 430 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 FAM212BQ9NTI7 297 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 TMEM56-RWDD3S4R434 201 aa15.87■□□□□ 0.13
TRAPPC12-220ENST00000482645 NBR2O15453 112 aa15.86■□□□□ 0.13
TRAPPC12-220ENST00000482645 HPRT1P00492 218 aa15.86■□□□□ 0.13
TRAPPC12-220ENST00000482645 RPA2P15927 270 aa15.86■□□□□ 0.13
TRAPPC12-220ENST00000482645 C9orf152Q5JTZ5 239 aa15.86■□□□□ 0.13
TRAPPC12-220ENST00000482645 MED28Q9H204 178 aa15.86■□□□□ 0.13
TRAPPC12-220ENST00000482645 C1RLQ9NZP8 487 aa15.86■□□□□ 0.13
TRAPPC12-220ENST00000482645 KIAA1456Q9P272 454 aa15.86■□□□□ 0.13
TRAPPC12-220ENST00000482645 A0A0B4J2A0 478 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 CCSO14618 274 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 GOSR2O14653 212 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 ADAP1O75689 374 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 HOXB5P09067 269 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 G6PCP35575 357 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 AKR1C2P52895 323 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 BLCAPP62952 87 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 PLGLAQ15195 96 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 KRTAP24-1Q3LI83 254 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 C5orf56Q8N8D9 126 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 LRTM2Q8N967 370 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 PLEKHA2Q9HB19 425 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 PLSCR3Q9NRY6 295 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 COMMD9Q9P000 198 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 SHPKQ9UHJ6 478 aa15.85■□□□□ 0.13
TRAPPC12-220ENST00000482645 M0QZK8 103 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 RPL15P61313 204 aaKnown RBP15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 RRAS2P62070 204 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 RELBQ01201 579 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 ARSJQ5FYB0 599 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 LYZL2Q7Z4W2 148 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 VKORC1L1Q8N0U8 176 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 CADM3Q8N126 398 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 OR8H1Q8NGG4 311 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 IL22RA2Q969J5 263 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 R3HDM4Q96D70 268 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 TSNAXQ99598 290 aaKnown RBP15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 RASL11BQ9BPW5 248 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 MGAT4CQ9UBM8 478 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 DBX1A6NMT0 343 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 MARCH11A6NNE9 402 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 SLC25A17O43808 307 aa15.84■□□□□ 0.13
TRAPPC12-220ENST00000482645 KRASP01116 189 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms