RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MFSD8Q8NHS3 518 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 CPNE2Q96FN4 548 aaPredicted RBP2.3□□□□□ -2.04
SF3B1-210ENST00000482158 PECRQ9BY49 303 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 MS4A6AQ9H2W1 248 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 DMAC2Q9NW81 257 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 FAM206AQ9NX38 181 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 NUBP2Q9Y5Y2 271 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 ZNF518AQ6AHZ1 1483 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 OTOFQ9HC10 1997 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 WDR97A6NE52 1622 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 NCOA1Q15788 1441 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 C17orf51A8MQB3 221 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 KPNA4O00629 521 aaPredicted RBP2.29□□□□□ -2.04
SF3B1-210ENST00000482158 UGT2B11O75310 529 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 S1PR2O95136 353 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 GZMHP20718 246 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 TMEM97Q5BJF2 176 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 EBLN2Q6P2I7 272 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 IDO2Q6ZQW0 420 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 LRRC18Q8N456 261 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 STX19Q8N4C7 294 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 SMIM20Q8N5G0 67 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 UBL4BQ8N7F7 174 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 YIPF7Q8N8F6 280 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 OR13D1Q8NGV5 346 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 Q8WTZ3 238 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 EEF1AKMT1Q8WVE0 214 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 IMP4Q96G21 291 aaKnown RBP2.29□□□□□ -2.04
SF3B1-210ENST00000482158 MED18Q9BUE0 208 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 MIXL1Q9H2W2 232 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 OR51I1Q9H343 314 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 GSKIPQ9P0R6 139 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 FAM32AQ9Y421 112 aaKnown RBP2.29□□□□□ -2.04
SF3B1-210ENST00000482158 ASB4Q9Y574 426 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 HSPE1-MOB4S4R3N1 261 aa2.29□□□□□ -2.04
SF3B1-210ENST00000482158 MYO9BQ13459 2157 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 A0A1B0GV90 55 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 DAPL1A0PJW8 107 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 METTL15A6NJ78 407 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 PPP5D1E7EU14 171 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ATP6V1G2-DDX39BF2Z307 99 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 F5H5K5 113 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 F8W036 122 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 GPR31O00270 319 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 PHYHO14832 338 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 CHP2O43745 196 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 CST8O60676 142 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 CYBAP13498 195 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 CTSEP14091 401 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ATF1P18846 271 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 PSMD8P48556 350 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 GNG3P63215 75 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 EDDM3AQ14507 147 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 TSNQ15631 228 aaKnown RBP2.28□□□□□ -2.04
SF3B1-210ENST00000482158 HIST3H3Q16695 136 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ARHGAP11BQ3KRB8 267 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 LIN52Q52LA3 116 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 C3orf62Q6ZUJ4 267 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 GLT6D1Q7Z4J2 308 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ZNF567Q8N184 647 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 OR10A6Q8NH74 314 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 LHFPL5Q8TAF8 219 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 STOML3Q8TAV4 291 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ASB17Q8WXJ9 295 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ASB13Q8WXK3 278 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 C11orf40Q8WZ69 217 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 TMBIM1Q969X1 311 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ZHX1-C8orf76Q96EF9 292 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 PFDN5Q99471 154 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 SIGMAR1Q99720 223 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 TMEM138Q9NPI0 162 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 BIN3Q9NQY0 253 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 VPS29Q9UBQ0 182 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 UFC1Q9Y3C8 167 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 SNX10Q9Y5X0 201 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 XIRP1Q702N8 1843 aaKnown RBP2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ADAMTSL1Q8N6G6 1762 aa2.28□□□□□ -2.04
SF3B1-210ENST00000482158 ADAMTS7Q9UKP4 1686 aa2.28□□□□□ -2.05
SF3B1-210ENST00000482158 MRC2Q9UBG0 1479 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 DOCK3Q8IZD9 2030 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 UHRF1BP1Q6BDS2 1440 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 CD109Q6YHK3 1445 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 A0A1W2PP64 1363 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 A0A087WUJ7 227 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 IGSF23A1L1A6 192 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 PRORSD1PA6NEY8 169 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 IFNA1P01562 189 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 FAM228BP0C875 321 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 CSRP1P21291 193 aaKnown RBP2.27□□□□□ -2.05
SF3B1-210ENST00000482158 CCR7P32248 378 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 CDC42P60953 191 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 BTN3A2P78410 334 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 IFITM2Q01629 132 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 PPP1R1AQ13522 171 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 PDGFRLQ15198 375 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 TRMT12Q53H54 448 aaKnown RBP2.27□□□□□ -2.05
SF3B1-210ENST00000482158 HENMT1Q5T8I9 393 aaKnown RBP2.27□□□□□ -2.05
SF3B1-210ENST00000482158 C1orf195Q5TG92 126 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 RPL13AP3Q6NVV1 102 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms