RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 HLA-DRB5Q30154 266 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 TMEM14EPQ6UXP3 125 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 EIF4E3Q8N5X7 224 aaKnown RBP9.53□□□□□ -0.88
GGPS1-205ENST00000482013 OR5C1Q8NGR4 320 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 OR4A5Q8NH83 315 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 DTD1Q8TEA8 209 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 TMED6Q8WW62 240 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 GNPNAT1Q96EK6 184 aaPredicted RBP9.53□□□□□ -0.88
GGPS1-205ENST00000482013 BSCL2Q96G97 398 aaPredicted RBP9.53□□□□□ -0.88
GGPS1-205ENST00000482013 CLCC1Q96S66 551 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 TSNAXQ99598 290 aaKnown RBP9.53□□□□□ -0.88
GGPS1-205ENST00000482013 ATP5SQ99766 215 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 TMEM140Q9NV12 185 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 FKBP11Q9NYL4 201 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 BET1LQ9NYM9 111 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 PRNDQ9UKY0 176 aa9.53□□□□□ -0.88
GGPS1-205ENST00000482013 FOXA2Q9Y261 457 aaPredicted RBP9.53□□□□□ -0.88
GGPS1-205ENST00000482013 STRAPQ9Y3F4 350 aaKnown RBP9.53□□□□□ -0.88
GGPS1-205ENST00000482013 ARID1AO14497 2285 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 CEBPZOSA8MTT3 80 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 A8MXK9 166 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 CST7O76096 145 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 IFNA5P01569 189 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 IGHV2-5P01817 119 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 OR8U8P0C7N1 319 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 DYNLT3P51808 116 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 FAM74A1Q5RGS3 127 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 CLEC9AQ6UXN8 241 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.89
GGPS1-205ENST00000482013 TGIF2LXQ8IUE1 241 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 OR4C13Q8NGP0 309 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 VSTM2AQ8TAG5 236 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 LHX4Q969G2 390 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 QTRT1Q9BXR0 403 aaKnown RBP9.52□□□□□ -0.89
GGPS1-205ENST00000482013 MRPL20Q9BYC9 149 aaKnown RBP9.52□□□□□ -0.89
GGPS1-205ENST00000482013 UNKLQ9H9P5 680 aaKnown RBP9.52□□□□□ -0.89
GGPS1-205ENST00000482013 BARX1Q9HBU1 254 aaPredicted RBP9.52□□□□□ -0.89
GGPS1-205ENST00000482013 TMEM14BQ9NUH8 114 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 ZNF257Q9Y2Q1 563 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 WASHC3Q9Y3C0 194 aa9.52□□□□□ -0.89
GGPS1-205ENST00000482013 MALRD1Q5VYJ5 2156 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 C15orf61A6NNL5 157 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 C22orf46C9J442 243 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 UMAD1C9J7I0 102 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 BUB1B-PAK6H3BSN5 160 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 TRIM77I1YAP6 450 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 NDUFS8O00217 210 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 UPK2O00526 184 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 ENSAO43768 121 aaKnown RBP9.51□□□□□ -0.89
GGPS1-205ENST00000482013 IFNA17P01571 189 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 PRTN3P24158 256 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 LGALS7P47929 136 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
GGPS1-205ENST00000482013 HSPE1P61604 102 aaKnown RBP9.51□□□□□ -0.89
GGPS1-205ENST00000482013 SPANXN5Q5MJ07 72 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 OR4A47Q6IF82 309 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 OR11H6Q8NGC7 330 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 PINX1Q96BK5 328 aaKnown RBP9.51□□□□□ -0.89
GGPS1-205ENST00000482013 FLYWCH2Q96CP2 140 aaKnown RBP9.51□□□□□ -0.89
GGPS1-205ENST00000482013 RNF5Q99942 180 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 REG4Q9BYZ8 158 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 HIPK2Q9H2X6 1198 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 KPTNQ9Y664 436 aa9.51□□□□□ -0.89
GGPS1-205ENST00000482013 ANKRD34BA5PLL1 514 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 MFSD2BA6NFX1 497 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 H7C2Y5 167 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 SHOXO15266 292 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 NDUFS7O75251 213 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 KBTBD11O94819 623 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 VDAC2P45880 294 aaPredicted RBP9.5□□□□□ -0.89
GGPS1-205ENST00000482013 CLINT1Q14677 625 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 SSX9Q7RTT3 188 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 ZNF525Q8N782 197 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 Q8N7P7 452 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 OR10P1Q8NGE3 313 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 PCNPQ8WW12 178 aaKnown RBP9.5□□□□□ -0.89
GGPS1-205ENST00000482013 CXorf58Q96LI9 332 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 CITED4Q96RK1 184 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 CCL19Q99731 98 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 ONECUT1Q9UBC0 465 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 NUP50Q9UKX7 468 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 TCF19Q9Y242 345 aa9.5□□□□□ -0.89
GGPS1-205ENST00000482013 POLR3KQ9Y2Y1 108 aaPredicted RBP9.5□□□□□ -0.89
GGPS1-205ENST00000482013 USP24Q9UPU5 2620 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 RAB19A4D1S5 217 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 PMS2P5A8MQ11 134 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 ZNF705EA8MWA4 302 aaPredicted RBP9.49□□□□□ -0.89
GGPS1-205ENST00000482013 LY6LH3BQJ8 138 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 FBXO24O75426 580 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 IGHV4-39P01824 125 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 ARG1P05089 322 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 METTL15P1P0C7V9 234 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 COX6B1P14854 86 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 PAX1P15863 534 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 USF1P22415 310 aaPredicted RBP9.49□□□□□ -0.89
GGPS1-205ENST00000482013 CEACAM3P40198 252 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 LMO4P61968 165 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 TMEM267Q0VDI3 215 aaPredicted RBP9.49□□□□□ -0.89
GGPS1-205ENST00000482013 AANATQ16613 207 aa9.49□□□□□ -0.89
GGPS1-205ENST00000482013 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms