RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 S100A16Q96FQ6 103 aaKnown RBP8.84□□□□□ -0.99
CCM2-213ENST00000480658 MS4A10Q96PG2 267 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 TPSG1Q9NRR2 321 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 U3KQK5 164 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 A0A087WXM4 84 aa8.83□□□□□ -1
CCM2-213ENST00000480658 RBFOX2O43251 390 aaKnown RBP eCLIP8.83□□□□□ -16e-11■■■■■ 38.6
CCM2-213ENST00000480658 FCGR3BO75015 233 aa8.83□□□□□ -1
CCM2-213ENST00000480658 OR2A4O95047 310 aa8.83□□□□□ -1
CCM2-213ENST00000480658 IGHV3-11P01762 117 aa8.83□□□□□ -1
CCM2-213ENST00000480658 SNRPBP14678 240 aaKnown RBP8.83□□□□□ -1
CCM2-213ENST00000480658 SLURP1P55000 103 aa8.83□□□□□ -1
CCM2-213ENST00000480658 NEDD8Q15843 81 aa8.83□□□□□ -1
CCM2-213ENST00000480658 RPEL1Q2QD12 228 aa8.83□□□□□ -1
CCM2-213ENST00000480658 UBE2NLQ5JXB2 153 aa8.83□□□□□ -1
CCM2-213ENST00000480658 THOC7Q6I9Y2 204 aaKnown RBP8.83□□□□□ -1
CCM2-213ENST00000480658 HOGA1Q86XE5 327 aa8.83□□□□□ -1
CCM2-213ENST00000480658 NECAP1Q8NC96 275 aa8.83□□□□□ -1
CCM2-213ENST00000480658 KCTD12Q96CX2 325 aaKnown RBP8.83□□□□□ -1
CCM2-213ENST00000480658 OR2A7Q96R45 310 aa8.83□□□□□ -1
CCM2-213ENST00000480658 PRR25Q96S07 402 aa8.83□□□□□ -1
CCM2-213ENST00000480658 OR51E2Q9H255 320 aa8.83□□□□□ -1
CCM2-213ENST00000480658 SIGLEC8Q9NYZ4 499 aa8.83□□□□□ -1
CCM2-213ENST00000480658 PEF1Q9UBV8 284 aaKnown RBP8.83□□□□□ -1
CCM2-213ENST00000480658 ZNF257Q9Y2Q1 563 aa8.83□□□□□ -1
CCM2-213ENST00000480658 DPPA5A6NC42 116 aa8.82□□□□□ -1
CCM2-213ENST00000480658 MSGN1A6NI15 193 aa8.82□□□□□ -1
CCM2-213ENST00000480658 LINC00473A8K010 186 aa8.82□□□□□ -1
CCM2-213ENST00000480658 XRCC3O43542 346 aa8.82□□□□□ -1
CCM2-213ENST00000480658 KBTBD11O94819 623 aa8.82□□□□□ -1
CCM2-213ENST00000480658 SAA1P0DJI8 122 aaPredicted RBP8.82□□□□□ -1
CCM2-213ENST00000480658 GP9P14770 177 aa8.82□□□□□ -1
CCM2-213ENST00000480658 HIST1H1BP16401 226 aaKnown RBP8.82□□□□□ -1
CCM2-213ENST00000480658 NFYAP23511 347 aaPredicted RBP8.82□□□□□ -1
CCM2-213ENST00000480658 S100GP29377 79 aa8.82□□□□□ -1
CCM2-213ENST00000480658 TAS2R46P59540 309 aa8.82□□□□□ -1
CCM2-213ENST00000480658 MXD1Q05195 221 aa8.82□□□□□ -1
CCM2-213ENST00000480658 LCN12Q6JVE5 192 aa8.82□□□□□ -1
CCM2-213ENST00000480658 ZNF343Q6P1L6 599 aa8.82□□□□□ -1
CCM2-213ENST00000480658 SGPP2Q8IWX5 399 aa8.82□□□□□ -1
CCM2-213ENST00000480658 OR5T1Q8NG75 326 aa8.82□□□□□ -1
CCM2-213ENST00000480658 OR9G4Q8NGQ1 327 aa8.82□□□□□ -1
CCM2-213ENST00000480658 OR13F1Q8NGS4 319 aa8.82□□□□□ -1
CCM2-213ENST00000480658 OR2K2Q8NGT1 345 aa8.82□□□□□ -1
CCM2-213ENST00000480658 TCTEX1D2Q8WW35 142 aa8.82□□□□□ -1
CCM2-213ENST00000480658 ALX4Q9H161 411 aaPredicted RBP8.82□□□□□ -1
CCM2-213ENST00000480658 ZMAT4Q9H898 229 aa8.82□□□□□ -1
CCM2-213ENST00000480658 IFT46Q9NQC8 304 aa8.82□□□□□ -1
CCM2-213ENST00000480658 TRAV18A0A075B6X5 111 aa8.81□□□□□ -1
CCM2-213ENST00000480658 SMIM30A4D0T7 59 aa8.81□□□□□ -1
CCM2-213ENST00000480658 NPIPB5A8MRT5 1133 aa8.81□□□□□ -1
CCM2-213ENST00000480658 IGLV1-51P01701 117 aa8.81□□□□□ -1
CCM2-213ENST00000480658 TAS2R31P59538 309 aa8.81□□□□□ -1
CCM2-213ENST00000480658 TMEM69Q5SWH9 247 aa8.81□□□□□ -1
CCM2-213ENST00000480658 HSD17B13Q7Z5P4 300 aaPredicted RBP8.81□□□□□ -1
CCM2-213ENST00000480658 GTSCR1Q86UQ5 136 aa8.81□□□□□ -1
CCM2-213ENST00000480658 LAX1Q8IWV1 398 aa8.81□□□□□ -1
CCM2-213ENST00000480658 TTC9CQ8N5M4 171 aa8.81□□□□□ -1
CCM2-213ENST00000480658 ADAD2Q8NCV1 583 aaKnown RBP8.81□□□□□ -1
CCM2-213ENST00000480658 OR5AP2Q8NGF4 316 aa8.81□□□□□ -1
CCM2-213ENST00000480658 CMTM3Q96MX0 182 aa8.81□□□□□ -1
CCM2-213ENST00000480658 SRSF8Q9BRL6 282 aaKnown RBP8.81□□□□□ -1
CCM2-213ENST00000480658 RSRP1Q9BUV0 290 aa8.81□□□□□ -1
CCM2-213ENST00000480658 ZNF430Q9H8G1 570 aaPredicted RBP8.81□□□□□ -1
CCM2-213ENST00000480658 THYN1Q9P016 225 aa8.81□□□□□ -1
CCM2-213ENST00000480658 IGKV1D-8A0A087WSZ0 117 aa8.8□□□□□ -1
CCM2-213ENST00000480658 SMIM31A0A1B0GVY4 71 aa8.8□□□□□ -1
CCM2-213ENST00000480658 SRRM4A7MD48 611 aaKnown RBP8.8□□□□□ -1
CCM2-213ENST00000480658 HPRT1P00492 218 aa8.8□□□□□ -1
CCM2-213ENST00000480658 PPYP01298 95 aa8.8□□□□□ -1
CCM2-213ENST00000480658 NQO2P16083 231 aa8.8□□□□□ -1
CCM2-213ENST00000480658 FCGR2CP31995 323 aa8.8□□□□□ -1
CCM2-213ENST00000480658 LINC00205P59089 165 aa8.8□□□□□ -1
CCM2-213ENST00000480658 HERV-K104P61576 105 aa8.8□□□□□ -1
CCM2-213ENST00000480658 RPL8P62917 257 aaKnown RBP8.8□□□□□ -1
CCM2-213ENST00000480658 SSBP2P81877 361 aaPredicted RBP8.8□□□□□ -1
CCM2-213ENST00000480658 ATP5G2Q06055 141 aa8.8□□□□□ -1
CCM2-213ENST00000480658 PJVKQ0ZLH3 352 aa8.8□□□□□ -1
CCM2-213ENST00000480658 KLF5Q13887 457 aaPredicted RBP8.8□□□□□ -1
CCM2-213ENST00000480658 IDO2Q6ZQW0 420 aa8.8□□□□□ -1
CCM2-213ENST00000480658 CMTM1Q8IZ96 169 aa8.8□□□□□ -1
CCM2-213ENST00000480658 Q8N402 240 aa8.8□□□□□ -1
CCM2-213ENST00000480658 MFSD4AQ8N468 514 aa8.8□□□□□ -1
CCM2-213ENST00000480658 TSPAN14Q8NG11 270 aa8.8□□□□□ -1
CCM2-213ENST00000480658 TMEM167AQ8TBQ9 72 aa8.8□□□□□ -1
CCM2-213ENST00000480658 CASTOR1Q8WTX7 329 aa8.8□□□□□ -1
CCM2-213ENST00000480658 GIMAP1Q8WWP7 306 aa8.8□□□□□ -1
CCM2-213ENST00000480658 SLC25A38Q96DW6 304 aa8.8□□□□□ -1
CCM2-213ENST00000480658 RBMXL1Q96E39 390 aaKnown RBP8.8□□□□□ -1
CCM2-213ENST00000480658 C5orf30Q96GV9 206 aa8.8□□□□□ -1
CCM2-213ENST00000480658 AUNIPQ9H7T9 357 aa8.8□□□□□ -1
CCM2-213ENST00000480658 BET1LQ9NYM9 111 aa8.8□□□□□ -1
CCM2-213ENST00000480658 TAS2R8Q9NYW2 309 aa8.8□□□□□ -1
CCM2-213ENST00000480658 TRBV9A0A0B4J1U6 114 aa8.79□□□□□ -1
CCM2-213ENST00000480658 A8MZ25 164 aa8.79□□□□□ -1
CCM2-213ENST00000480658 SSX5O60225 188 aa8.79□□□□□ -1
CCM2-213ENST00000480658 IGLV2-14P01704 120 aa8.79□□□□□ -1
CCM2-213ENST00000480658 SPNP16150 400 aa8.79□□□□□ -1
CCM2-213ENST00000480658 RPL27AP46776 148 aaKnown RBP8.79□□□□□ -1
CCM2-213ENST00000480658 RHOGP84095 191 aa8.79□□□□□ -1
CCM2-213ENST00000480658 DYRK1AQ13627 763 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms