RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FAUP35544 74 aaKnown RBP3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CRATP43155 626 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CBX5P45973 191 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 EVX1P49640 407 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CRISP1P54107 249 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 FGF12P61328 243 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 SELENOWP63302 87 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 REG3AQ06141 175 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 MADCAM1Q13477 382 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 COTL1Q14019 142 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 LGALS9BQ3B8N2 356 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 Q3ZCU0 254 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 SPIN4Q56A73 249 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CLVS2Q5SYC1 327 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 OR52W1Q6IF63 320 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 LCN12Q6JVE5 192 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 TEX261Q6UWH6 196 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 LRRN1Q6UXK5 716 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 ZFP2Q6ZN57 461 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 SSX8Q7RTT4 187 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 HS3ST5Q8IZT8 346 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 Q8N2B8 174 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 NPWQ8N729 165 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 ZNF565Q8N9K5 539 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 ZNF680Q8NEM1 530 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 OR51D1Q8NGF3 324 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 OR10Z1Q8NGY1 313 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 OR2G3Q8NGZ4 309 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CLHC1Q8NHS4 586 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CDC26Q8NHZ8 85 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 SKA2Q8WVK7 121 aaPredicted RBP3.02□□□□□ -1.93
CCDC171-207ENST00000478913 ASB13Q8WXK3 278 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 RAB1CQ92928 201 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 SGTBQ96EQ0 304 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 RNF170Q96K19 258 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 OR2A5Q96R48 311 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 TCEAL7Q9BRU2 100 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 VCX2Q9H322 139 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 ABCB9Q9NP78 766 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 VAPAQ9P0L0 249 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 COMMD3Q9UBI1 195 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CYB5R1Q9UHQ9 305 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 TBC1D24Q9ULP9 559 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 U3KQ87 197 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 IGKV3D-11A0A0A0MRZ8 115 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 CENPVL3A0A0U1RRI6 287 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 GNG14A0A1W2PPG7 69 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 C11orf94C9JXX5 98 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 LRRN3E7EW58 273 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TOR1AO14656 332 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TP53I11O14683 189 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 FABP7O15540 132 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 SYNGR1O43759 233 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 WBP4O75554 376 aaKnown RBP3.01□□□□□ -1.93
CCDC171-207ENST00000478913 CBR3O75828 277 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 OR5F1O95221 314 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 PTHP01270 115 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 HLA-DQB1P01920 261 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 GKN3PP0CG01 181 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 GPX2P18283 190 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 EVI2BP34910 448 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 RAB13P51153 203 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 XKP51811 444 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 AKR1D1P51857 326 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 PRRX1P54821 245 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 AP1S2P56377 157 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TAS2R43P59537 309 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 ACTA1P68133 377 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 IRF8Q02556 426 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 MXD1Q05195 221 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 IL24Q13007 206 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 GNMTQ14749 295 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 PTGES3Q15185 160 aaKnown RBP3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TMEM255AQ5JRV8 349 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 FAM27D1Q5T7N8 215 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 NXNL2Q5VZ03 156 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 C22orf42Q6IC83 251 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 NOXRED1Q6NXP6 359 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 CNIH2Q6PI25 160 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 LHFPL3Q86UP9 236 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 THOC6Q86W42 341 aaKnown RBP3.01□□□□□ -1.93
CCDC171-207ENST00000478913 LRRC28Q86X40 367 aaPredicted RBP3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TMEM183AQ8IXX5 376 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 UBE2J2Q8N2K1 259 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TOMM5Q8N4H5 51 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 FAM86B1Q8N7N1 296 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 OR2L3Q8NG85 312 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 OR4K2Q8NGD2 314 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 OR5M1Q8NGP8 315 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 OR13C2Q8NGS9 318 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TEX47Q8TBZ9 253 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 EEF1AKMT1Q8WVE0 214 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 SLC41A3Q96GZ6 507 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TEX37Q96LM6 180 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 FOPNLQ96NB1 174 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 TSSK3Q96PN8 268 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 OR4K3Q96R72 315 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 LYSMD1Q96S90 227 aa3.01□□□□□ -1.93
CCDC171-207ENST00000478913 MARVELD1Q9BSK0 173 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms