RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CGREF1Q99674 301 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 TSSK6Q9BXA6 273 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 PARVBQ9HBI1 364 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 HMG20AQ9NP66 347 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF355PQ9NSJ1 428 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 LYRM2Q9NU23 88 aaPredicted RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNRD1Q9P1U0 126 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 DNAJC12Q9UKB3 198 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 KIF26AQ9ULI4 1882 aaPredicted RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 MRPS16Q9Y3D3 137 aaKnown RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 THSD7AQ9UPZ6 1657 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 TNS2Q63HR2 1409 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 IGHV3-49A0A0A0MS15 119 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 IGHV1-69-2A0A0G2JMI3 117 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 SIGLEC16A6NMB1 481 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 LST1O00453 97 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 SCO1O75880 301 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 CRYZL1O95825 349 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 CXorf1O96002 111 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 OR10J4P0C629 311 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 INAFM2P0DMQ5 153 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 ERP29P30040 261 aaKnown RBP2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 S100A7P31151 101 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 NCALDP61601 193 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 AP1S1P61966 158 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 SYCNQ0VAF6 134 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 FABP9Q0Z7S8 132 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 MMDQ15546 238 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 PLPPR5Q32ZL2 321 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 SP6Q3SY56 376 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF678Q5SXM1 525 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 IBA57Q5T440 356 aaKnown RBP2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 IGFL1Q6UW32 110 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 TOMM20LQ6UXN7 152 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 BAP18Q8IXM2 172 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 EXOC3-AS1Q8N2X6 119 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 C12orf45Q8N5I9 185 aaPredicted RBP2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 KRTCAP2Q8N6L1 136 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF615Q8N8J6 731 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF709Q8N972 641 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 OR5J2Q8NH18 312 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 OR4A5Q8NH83 315 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 SGMS2Q8NHU3 365 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 C2orf15Q8WU43 125 aaKnown RBP2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 SKA2Q8WVK7 121 aaPredicted RBP2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 ROPN1LQ96C74 230 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 GPR146Q96CH1 333 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 MS4A6EQ96DS6 147 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 GNPNAT1Q96EK6 184 aaPredicted RBP2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 CCL13Q99616 98 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 FAM96AQ9H5X1 160 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 TMEM138Q9NPI0 162 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 ACER3Q9NUN7 267 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 JPT1Q9UK76 154 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 TMEM14AQ9Y6G1 99 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 RTL1A6NKG5 1358 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 CEP152O94986 1710 aa2.2□□□□□ -2.06
SMARCA1-204ENST00000478420 MIA3Q5JRA6 1907 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 hCG_1818297A0A087WSY0 165 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 A8MT66 165 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 A8MUN3 132 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 A8MWL6 223 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 H7C1C5 153 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 COX7A2LO14548 114 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 RGS5O15539 181 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 CDRT1O95170 752 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 HLA-DQA1P01909 254 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 ADRA2AP08913 450 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 LGALS1P09382 135 aaKnown RBP2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 OR56A5P0C7T3 313 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF806P0C7X5 589 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 CA7P43166 264 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 SRP9P49458 86 aaKnown RBP2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 CDC42P60953 191 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 LCN6P62502 163 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 CST6Q15828 149 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 KLHL12Q53G59 568 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 Q5W150 140 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 SGPP2Q8IWX5 399 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 LYPD1Q8N2G4 141 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 LRRC18Q8N456 261 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 FAM24BQ8N5W8 94 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF283Q8N7M2 679 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 OR8A1Q8NGG7 326 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 ITLN2Q8WWU7 325 aaPredicted RBP2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 IGF2BP2-AS1Q96M15 143 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF382Q96SR6 550 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 SERPINI1Q99574 410 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 KLF6Q99612 283 aaPredicted RBP2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 B9D2Q9BPU9 175 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 SHANK2-AS3Q9BTD1 123 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 CHCHD7Q9BUK0 85 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 EFCAB11Q9BUY7 163 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 PLA2G12AQ9BZM1 189 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF286AQ9HBT8 521 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 TAAR3PQ9P1P4 343 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 SSR3Q9UNL2 185 aa2.19□□□□□ -2.06
SMARCA1-204ENST00000478420 CYSLTR1Q9Y271 337 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms