RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 IFNA10P01566 189 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 IFNGP01579 166 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 IGKV5-2P06315 115 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 OR10J4P0C629 311 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 P0DMU3 169 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 FAM231AP0DMU4 169 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 FAM231CP0DMU5 169 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ESDP10768 282 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CYBAP13498 195 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ZNF25P17030 456 aaPredicted RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 ALOX5APP20292 161 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 PRTN3P24158 256 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 S100GP29377 79 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ERP29P30040 261 aaKnown RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 IFNGR2P38484 337 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CD200P41217 278 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 AKR1C3P42330 323 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 RPL35P42766 123 aaKnown RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 SERPINB10P48595 397 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 AKR1D1P51857 326 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CDC42P60953 191 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 RAB2AP61019 212 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CD164Q04900 197 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 OR2F1Q13607 317 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 SURF2Q15527 256 aaPredicted RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 GRK1Q15835 563 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ARHGAP11BQ3KRB8 267 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ACSBG2Q5FVE4 666 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 C9orf64Q5T6V5 341 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CST9Q5W186 159 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ELP2Q6IA86 826 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 LPCAT3Q6P1A2 487 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 SCIMPQ6UWF3 145 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 SLC36A1Q7Z2H8 476 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 GRINAQ7Z429 371 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 GLT6D1Q7Z4J2 308 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 FAM19A5Q7Z5A7 132 aaPredicted RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 MRPL52Q86TS9 123 aaKnown RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 NIT1Q86X76 327 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ANGPTL5Q86XS5 388 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ZBTB8OSQ8IWT0 167 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ZNF676Q8N7Q3 588 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 OR5C1Q8NGR4 320 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 GRPEL2Q8TAA5 225 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 FAM45AQ8TCE6 357 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 SPPL2BQ8TCT7 592 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 TNFAIP8L1Q8WVP5 186 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ASB17Q8WXJ9 295 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CCL17Q92583 94 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CLDN23Q96B33 292 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 C12orf43Q96C57 262 aaKnown RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 SIGMAR1Q99720 223 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 VPS25Q9BRG1 176 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CHST5Q9GZS9 411 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 CCDC90BQ9GZT6 254 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 SLC25A31Q9H0C2 315 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 OR51I1Q9H343 314 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 MAP1LC3AQ9H492 121 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 TUBA4BQ9H853 241 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 NMNAT1Q9HAN9 279 aaPredicted RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 ACOT13Q9NPJ3 140 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 TAS2R13Q9NYV9 303 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 TP53TG1Q9Y2A0 90 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 UTP11Q9Y3A2 253 aaKnown RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 CHD2O14647 1828 aaKnown RBP1.16□□□□□ -2.22
VPS50-213ENST00000477572 FOCADQ5VW36 1801 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ATAD5Q96QE3 1844 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 KIF13BQ9NQT8 1826 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 PLXND1Q9Y4D7 1925 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 ADAMTSL1Q8N6G6 1762 aa1.16□□□□□ -2.22
VPS50-213ENST00000477572 NISCHQ9Y2I1 1504 aa1.15□□□□□ -2.22
VPS50-213ENST00000477572 NALCNQ8IZF0 1738 aa1.15□□□□□ -2.22
VPS50-213ENST00000477572 PHIPQ8WWQ0 1821 aa1.15□□□□□ -2.22
VPS50-213ENST00000477572 A0A087WUJ7 227 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 EXOC1LA0A1B0GW35 172 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 IGSF23A1L1A6 192 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 FAM92AA1XBS5 289 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 VPS37CA5D8V6 355 aaPredicted RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 OR5H14A6NHG9 310 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 FAM159BA6NKW6 160 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 C5orf58C9J3I9 102 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 PPP5D1E7EU14 171 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 ZNF593O00488 134 aaPredicted RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 CYB5BO43169 146 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 SSNA1O43805 119 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 PDE6DO43924 150 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 SULT1C4O75897 302 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 HAND1O96004 215 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 PDYNP01213 254 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 IFNA1P01562 189 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 CD8AP01732 235 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 C1QCP02747 245 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 IFNA4P05014 189 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 S100A8P05109 93 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 SERPINA7P05543 415 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 BPGMP07738 259 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 CNTFRP26992 372 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 RPL12P30050 165 aaKnown RBP1.15□□□□□ -2.23
VPS50-213ENST00000477572 PYCR1P32322 319 aa1.15□□□□□ -2.23
VPS50-213ENST00000477572 CA5AP35218 305 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms