RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 TIMM9Q9Y5J7 89 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 PUS1Q9Y606 427 aaKnown RBP eCLIP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 SAA2-SAA4A0A096LPE2 208 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 LOC102723971A0A1B0GUV8 181 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 ZNF729A6NN14 1252 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 FAM90A9PA6NNJ1 464 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 COLCA2A8K830 154 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 HSPB1P04792 205 aaKnown RBP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 SAA2P0DJI9 122 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 DAOP14920 347 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 NDUFB7P17568 137 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 FGF7P21781 194 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 GNG10P50151 68 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 FGF8P55075 233 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 FLI1Q01543 452 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 SSX8Q7RTT4 187 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 DDB2Q92466 427 aa9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 PINX1Q96BK5 328 aaKnown RBP9.09□□□□□ -0.95
HLA-DMB-260ENST00000477537 C15orf62A8K5M9 175 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMPRSS2O15393 492 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 NQO2P16083 231 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 MRPS11P82912 194 aaKnown RBP9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 TLE1Q04724 770 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 TFF3Q07654 80 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 LY6DQ14210 128 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 RHEBQ15382 184 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 AARDQ4LEZ3 155 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 KHDC3LQ587J8 217 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 AVPI1Q5T686 147 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 LYG1Q8N1E2 194 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 C15orf54Q8N8G6 183 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 CYB561D1Q8N8Q1 229 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZNF439Q8NDP4 499 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR4S2Q8NH73 311 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 CORO2AQ92828 525 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 EGLN1Q9GZT9 426 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 UNKLQ9H9P5 680 aaKnown RBP9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMEM140Q9NV12 185 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 ROS1P08922 2347 aa9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 TET2Q6N021 2002 aaPredicted RBP9.08□□□□□ -0.96
HLA-DMB-260ENST00000477537 TRAV3A0A0B4J244 114 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 TRAV38-1A0A0B4J264 116 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 hADV38S2A0JD32 116 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZFP92A6NM28 416 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 VSTM5A8MXK1 200 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 MMP23AO75900 390 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 CRYBA1P05813 215 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 CTRB1P17538 263 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 THBS3P49746 956 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 SPCS3P61009 180 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 GNB2P62879 340 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 RELBQ01201 579 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 CTRB2Q6GPI1 263 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 ACSM6Q6P461 480 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 CENPVQ7Z7K6 275 aaPredicted RBP9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 SAP30LQ9HAJ7 183 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 TRGV8A0A0C4DH27 118 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 MAP1LC3B2A6NCE7 125 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 H3BQ15 152 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 EIF3GO75821 320 aaKnown RBP eCLIP9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 IGKV1D-33P01593 117 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 IGKV1-33P01594 117 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 VWC2Q2TAL6 325 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZNF383Q8NA42 475 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 OR52E5Q8NH55 327 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZNF251Q9BRH9 671 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 MAP1LC3BQ9GZQ8 125 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 LINC00574Q9H8X3 128 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 NGBQ9NPG2 151 aa9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 SLC25A10Q9UBX3 287 aaPredicted RBP9.07□□□□□ -0.96
HLA-DMB-260ENST00000477537 SHISA9B4DS77 424 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMEM178BH3BS89 294 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 LY86O95711 162 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 IFNA10P01566 189 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 BCL2P10415 239 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 PAX6P26367 422 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 RPP30P78346 268 aaKnown RBP9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 FFAR4Q5NUL3 377 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 ZNF429Q86V71 674 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 IQCF2Q8IXL9 164 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 NEUROG1Q92886 237 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 HIST1H2BAQ96A08 127 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 ISOC2Q96AB3 205 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 ADTRPQ96IZ2 230 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 VKORC1Q9BQB6 163 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 NPCDR1Q9BY65 106 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 HEYLQ9NQ87 328 aaPredicted RBP9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 CISD1Q9NZ45 108 aaKnown RBP9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 RPUSD1Q9UJJ7 312 aaKnown RBP9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 LINC00312Q9Y6C7 94 aa9.06□□□□□ -0.96
HLA-DMB-260ENST00000477537 PPIAL4EA0A075B759 164 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 A0A1W2PPE2 198 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 A0A1W2PPH5 198 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 E7EQL1 145 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 PPIAL4DF5H284 164 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 ARG1P05089 322 aa9.05□□□□□ -0.96
HLA-DMB-260ENST00000477537 PPIAL4FP0DN26 164 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms