RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MAFIPQ8WZ33 124 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 SPIN2AQ99865 258 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 SPIN2BQ9BPZ2 258 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 PECRQ9BY49 303 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 LPAR5Q9H1C0 372 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 ZNF430Q9H8G1 570 aaPredicted RBP5□□□□□ -1.61
RTFDC1-206ENST00000477485 FBXL17Q9UF56 701 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 MLXQ9UH92 298 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
RTFDC1-206ENST00000477485 IGHV3-35A0A0C4DH35 117 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 TMEM14DPA8MWL7 114 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 FCGR3BO75015 233 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 REG1AP05451 166 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 GSTT2P0CG29 244 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 GSTT2BP0CG30 244 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 SAA1P0DJI8 122 aaPredicted RBP4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 DEFA4P12838 97 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 RPL35AP18077 110 aaKnown RBP4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 CRHBPP24387 322 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 BMI1P35226 326 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 CLDN12P56749 244 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 CDK10Q15131 360 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 MED22Q15528 200 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 RAB11BQ15907 218 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 ZNF585BQ52M93 769 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 FAM209BQ5JX69 171 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 C1orf100Q5SVJ3 147 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 OR4A47Q6IF82 309 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 KCTD9Q7L273 389 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 LRRTM1Q86UE6 522 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 SLC25A42Q86VD7 318 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 MMD2Q8IY49 270 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 C10orf67Q8IYJ2 551 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 SLC38A6Q8IZM9 456 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 PQLC1Q8N2U9 271 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 STPG3Q8N7X2 389 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 TEX45Q8NA69 505 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 OR56B1Q8NGI3 324 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 FBLIM1Q8WUP2 373 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 PHLDA1Q8WV24 401 aaPredicted RBP4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 PHYHIPQ92561 330 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 EEF1AKMT3Q96AZ1 226 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 C5orf30Q96GV9 206 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 ADTRPQ96IZ2 230 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 FRAS1Q86XX4 4008 aa4.99□□□□□ -1.61
RTFDC1-206ENST00000477485 TRBV9A0A0B4J1U6 114 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 TMEM213A2RRL7 107 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 LINC00473A8K010 186 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 LGALS9O00182 355 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 RAB27BO00194 218 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 DHFRP00374 187 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 FCGR3AP08637 254 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 DUTP33316 252 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 TALDO1P37837 337 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 RPL27AP46776 148 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 SMCPP49901 116 aaPredicted RBP4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 QRFPP83859 136 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 TNFRSF9Q07011 255 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 ARFRP1Q13795 201 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 MRGPRG-AS1Q2M3A8 158 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 SSX9Q7RTT3 188 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 VKORC1L1Q8N0U8 176 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 TTC9CQ8N5M4 171 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 MS4A15Q8N5U1 240 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 OR2C3Q8N628 320 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 ZNF485Q8NCK3 441 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 BPIFB6Q8NFQ5 453 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 OR5B3Q8NH48 314 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 OSR1Q8TAX0 266 aaPredicted RBP4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 GATAD1Q8WUU5 269 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 TMEM203Q969S6 136 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 MND1Q9BWT6 205 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 S100A14Q9HCY8 104 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 HSF4Q9ULV5 492 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 ZNF257Q9Y2Q1 563 aa4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 MRPS7Q9Y2R9 242 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 AK6Q9Y3D8 172 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-206ENST00000477485 A8MWP6 167 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 SLC17A2O00624 439 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 DENRO43583 198 aaKnown RBP4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 IFNA4P05014 189 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 CD1AP06126 327 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 HSMCR30P0CW71 290 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 GADD45AP24522 165 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 GPR183P32249 361 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 PSMD7P51665 324 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 TMEM50BP56557 158 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 NANOS2P60321 138 aaKnown RBP4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 RBMS2Q15434 407 aaKnown RBP4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 PLAC9Q5JTB6 97 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 HES5Q5TA89 166 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 LGALS9CQ6DKI2 356 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 Q6ZWC4 215 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 GPHB5Q86YW7 130 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 C8orf59Q8N0T1 100 aaPredicted RBP4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 DHRSXQ8N5I4 330 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 NANOGP1Q8N7R0 232 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 TCTEX1D2Q8WW35 142 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 RAB3CQ96E17 227 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 CCDC140Q96MF4 163 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms