RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 RPA2P15927 270 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 IL3RAP26951 378 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 CD34P28906 385 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 PPP1CCP36873 323 aaKnown RBP5.12□□□□□ -1.59
CLDN4-205ENST00000476494 GPR12P47775 334 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 DLX6P56179 175 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 ERVFRD-1P60508 538 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 CYCSP99999 105 aaKnown RBP5.12□□□□□ -1.59
CLDN4-205ENST00000476494 TAGLNQ01995 201 aaKnown RBP5.12□□□□□ -1.59
CLDN4-205ENST00000476494 CATR1Q13166 79 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 PPP1R1AQ13522 171 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 ZNF273Q14593 569 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 FAM71F2Q6NXP2 309 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 AKAP14Q86UN6 197 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 LGI3Q8N145 548 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 RPP25LQ8N5L8 163 aaKnown RBP5.12□□□□□ -1.59
CLDN4-205ENST00000476494 LRTM2Q8N967 370 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 OR9G1Q8NH87 305 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 ZNF596Q8TC21 504 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 PIFOQ8TCI5 191 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 CD300LFQ8TDQ1 290 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 DPF1Q92782 380 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 IL22RA2Q969J5 263 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 TMEM230Q96A57 120 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 ADTRPQ96IZ2 230 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 SEC22CQ9BRL7 303 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 TM2D3Q9BRN9 247 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 AGMATQ9BSE5 352 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 ABHD14AQ9BUJ0 271 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 TMEM133Q9H2Q1 129 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 METTL8Q9H825 291 aaKnown RBP5.12□□□□□ -1.59
CLDN4-205ENST00000476494 HEXA-AS1Q9H8Q6 139 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 RAB18Q9NP72 206 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 CCL28Q9NRJ3 127 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 KPTNQ9Y664 436 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
CLDN4-205ENST00000476494 IGKV1D-13A0A0B4J2D9 117 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 BTBD17A6NE02 478 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 H0Y980 276 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 TOR1AO14656 332 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 HSD17B6O14756 317 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 CCNKO75909 580 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 IFNA21P01568 189 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PF4P02776 101 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 SERPINE2P07093 398 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 IGKV1-13P0DP09 117 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PF4V1P10720 104 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 CCL3L1P16619 93 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PI3P19957 117 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 F2RP25116 425 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 NFYBP25208 207 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 KIR2DS2P43631 304 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 RAP2BP61225 183 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 SUPT4H1P63272 117 aaKnown RBP5.11□□□□□ -1.59
CLDN4-205ENST00000476494 GNMTQ14749 295 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PHLDA2Q53GA4 152 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 CT45A1Q5HYN5 189 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PRAMEF5Q5TYX0 476 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 NCR3LG1Q68D85 454 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 LIAT1Q6ZQX7 453 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 ZNF818PQ6ZRF7 136 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 Q6ZS46 218 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 SLC25A48Q6ZT89 311 aaKnown RBP5.11□□□□□ -1.59
CLDN4-205ENST00000476494 C5orf24Q7Z6I8 188 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 TBC1D26Q86UD7 250 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PDZD9Q8IXQ8 264 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 C11orf42Q8N5U0 333 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 DRAM1Q8N682 238 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 ZNF439Q8NDP4 499 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 BEND2Q8NDZ0 799 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 OR13D1Q8NGV5 346 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 CT45A3Q8NHU0 189 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 UBALD1Q8TB05 177 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 CAPSLQ8WWF8 208 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 TMEM56Q96MV1 263 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 S1PR3Q99500 378 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 NEURL2Q9BR09 285 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 AIFM2Q9BRQ8 373 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 TMEM222Q9H0R3 208 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 OR2D2Q9H210 308 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 LIN7CQ9NUP9 197 aaKnown RBP5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PSG11Q9UQ72 335 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 PRELID3BQ9Y3B1 194 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 FAM96BQ9Y3D0 163 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 AMMECR1Q9Y4X0 333 aaPredicted RBP5.11□□□□□ -1.59
CLDN4-205ENST00000476494 TMEM56-RWDD3S4R434 201 aa5.11□□□□□ -1.59
CLDN4-205ENST00000476494 IGHV3-43A0A0B4J1X8 118 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 DBX1A6NMT0 343 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 H3BUX3 64 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 J3QR06 171 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 RBFOX2O43251 390 aaKnown RBP eCLIP5.1□□□□□ -1.59
CLDN4-205ENST00000476494 TXNL1O43396 289 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 OR2A4O95047 310 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 CDS2O95674 445 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 IGLV2-14P01704 120 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 GIPP09681 153 aaPredicted RBP5.1□□□□□ -1.59
CLDN4-205ENST00000476494 IGHV3-43DP0DP04 118 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 RRASP10301 218 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 UCP1P25874 307 aa5.1□□□□□ -1.59
CLDN4-205ENST00000476494 CEACAM3P40198 252 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms