RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 MORN2Q502X0 79 aa15.73■□□□□ 0.11
SYF2-204ENST00000476231 OR4C12Q96R67 309 aa15.73■□□□□ 0.11
SYF2-204ENST00000476231 CLN8Q9UBY8 286 aa15.73■□□□□ 0.11
SYF2-204ENST00000476231 C17orf98A8MV24 154 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 TNFRSF13BO14836 293 aaPredicted RBP15.72■□□□□ 0.11
SYF2-204ENST00000476231 NDUFS6O75380 124 aaKnown RBP15.72■□□□□ 0.11
SYF2-204ENST00000476231 HAGHQ16775 308 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 LTC4SQ16873 150 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 AARDQ4LEZ3 155 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 AKIRIN2Q53H80 203 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 TMEM41BQ5BJD5 291 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 TAF15Q92804 592 aaKnown RBP eCLIP15.72■□□□□ 0.11
SYF2-204ENST00000476231 RSG1Q9BU20 258 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 COL6A6A6NMZ7 2263 aa15.72■□□□□ 0.11
SYF2-204ENST00000476231 ZNF729A6NN14 1252 aaPredicted RBP15.71■□□□□ 0.11
SYF2-204ENST00000476231 S1PR2O95136 353 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 KRASP01116 189 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 G6PCP35575 357 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 TMEM30BQ3MIR4 351 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 SLC35E3Q7Z769 313 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 P2RX4Q99571 388 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 LINC00574Q9H8X3 128 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 SLC25A10Q9UBX3 287 aaPredicted RBP15.71■□□□□ 0.11
SYF2-204ENST00000476231 PSG11Q9UQ72 335 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 GAB2Q9UQC2 676 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 KALRNO60229 2985 aa15.71■□□□□ 0.11
SYF2-204ENST00000476231 hADV38S2A0JD32 116 aa15.71■□□□□ 0.1
SYF2-204ENST00000476231 H3BQ15 152 aa15.71■□□□□ 0.1
SYF2-204ENST00000476231 ITGB1BP1O14713 200 aa15.71■□□□□ 0.1
SYF2-204ENST00000476231 AKR1C3P42330 323 aa15.71■□□□□ 0.1
SYF2-204ENST00000476231 ZNF816Q0VGE8 651 aaPredicted RBP15.71■□□□□ 0.1
SYF2-204ENST00000476231 HABP2Q14520 560 aaPredicted RBP15.71■□□□□ 0.1
SYF2-204ENST00000476231 H2BFWTQ7Z2G1 175 aa15.71■□□□□ 0.1
SYF2-204ENST00000476231 ST8SIA5O15466 376 aa15.7■□□□□ 0.1
SYF2-204ENST00000476231 NDUFB7P17568 137 aa15.7■□□□□ 0.1
SYF2-204ENST00000476231 MEF2CQ06413 473 aaPredicted RBP15.7■□□□□ 0.1
SYF2-204ENST00000476231 TCF23Q7RTU1 214 aa15.7■□□□□ 0.1
SYF2-204ENST00000476231 TMEM147Q9BVK8 224 aa15.7■□□□□ 0.1
SYF2-204ENST00000476231 KAAG1Q9UBP8 84 aa15.7■□□□□ 0.1
SYF2-204ENST00000476231 PUS1Q9Y606 427 aaKnown RBP eCLIP15.7■□□□□ 0.1
SYF2-204ENST00000476231 LINC00312Q9Y6C7 94 aa15.7■□□□□ 0.1
SYF2-204ENST00000476231 ARFGEF3Q5TH69 2177 aa15.7■□□□□ 0.1
SYF2-204ENST00000476231 PMS2P5A8MQ11 134 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 B4DEV8 164 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 RBFOX2O43251 390 aaKnown RBP eCLIP15.69■□□□□ 0.1
SYF2-204ENST00000476231 RAB5AP20339 215 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 ZNF787Q6DD87 383 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 ZNF429Q86V71 674 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 TVP23CQ96ET8 276 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 YPEL4Q96NS1 127 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 C20orf24Q9BUV8 137 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 GFOD1Q9NXC2 390 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 DSCAML1Q8TD84 2053 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 CXorf65A6NEN9 183 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 MBP02144 154 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 BCL2P10415 239 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 GNB2P62879 340 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 VWC2Q2TAL6 325 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 DTD1Q8TEA8 209 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 RCC1LQ96I51 464 aaKnown RBP15.69■□□□□ 0.1
SYF2-204ENST00000476231 NIPSNAP3BQ9BS92 247 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 SIRT7Q9NRC8 400 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 CBLN4Q9NTU7 201 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 IDI2-AS1Q9NZ38 188 aa15.69■□□□□ 0.1
SYF2-204ENST00000476231 DIDO1Q9BTC0 2240 aaKnown RBP15.69■□□□□ 0.1
SYF2-204ENST00000476231 NDUFB3O43676 98 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 FSTL3O95633 263 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 IFNA1P01562 189 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 DUTP33316 252 aaKnown RBP15.68■□□□□ 0.1
SYF2-204ENST00000476231 GPR12P47775 334 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 RAB7AP51149 207 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 ZNF726P1Q15940 193 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 C1QL4Q86Z23 238 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 OR10P1Q8NGE3 313 aa15.68■□□□□ 0.1
SYF2-204ENST00000476231 ANKHD1Q8IWZ3 2542 aaKnown RBP15.68■□□□□ 0.1
SYF2-204ENST00000476231 A0A1W2PPH5 198 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 LINC00473A8K010 186 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 HPRT1P00492 218 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 TAGLN2P37802 199 aaKnown RBP15.67■□□□□ 0.1
SYF2-204ENST00000476231 Q3ZCU0 254 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 LRRC10Q5BKY1 277 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 CYB561D1Q8N8Q1 229 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 RAB39BQ96DA2 213 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 SOX15O60248 233 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 OR2C1O95371 312 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 KIR2DS2P43631 304 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 PNRC1Q12796 327 aaPredicted RBP15.67■□□□□ 0.1
SYF2-204ENST00000476231 LYPD2Q6UXB3 125 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 BTNL3Q6UXE8 466 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 OR10A7Q8NGE5 316 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 RAB1BQ9H0U4 201 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 GAL3ST2Q9H3Q3 398 aa15.67■□□□□ 0.1
SYF2-204ENST00000476231 RELNP78509 3460 aa15.66■□□□□ 0.1
SYF2-204ENST00000476231 ROS1P08922 2347 aa15.66■□□□□ 0.1
SYF2-204ENST00000476231 MARCH11A6NNE9 402 aa15.66■□□□□ 0.1
SYF2-204ENST00000476231 DAOP14920 347 aa15.66■□□□□ 0.1
SYF2-204ENST00000476231 RPL31P62899 125 aaKnown RBP15.66■□□□□ 0.1
SYF2-204ENST00000476231 PDLIM3Q53GG5 364 aaPredicted RBP15.66■□□□□ 0.1
SYF2-204ENST00000476231 OR2B11Q5JQS5 317 aa15.66■□□□□ 0.1
SYF2-204ENST00000476231 OR52E5Q8NH55 327 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms