RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 LYL1P12980 280 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 RAB3BP20337 219 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 EDN2P20800 178 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 GALP22466 123 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 AADACP22760 399 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 MRPS15P82914 257 aaKnown RBP5.32□□□□□ -1.56
HDAC3-207ENST00000475549 RHOGP84095 191 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 TAGLNQ01995 201 aaKnown RBP5.32□□□□□ -1.56
HDAC3-207ENST00000475549 ARFRP1Q13795 201 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 TNXAQ16473 311 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 HAGHQ16775 308 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 RTL8BQ17RB0 113 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 UBE2UQ5VVX9 321 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 SPARTQ8N0X7 666 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 TTC9CQ8N5M4 171 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 NUDCD2Q8WVJ2 157 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 GPHA2Q96T91 129 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 GINS4Q9BRT9 223 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 ATG5Q9H1Y0 275 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 TXNL4BQ9NX01 149 aaKnown RBP5.32□□□□□ -1.56
HDAC3-207ENST00000475549 COA4Q9NYJ1 87 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 SIGLEC8Q9NYZ4 499 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 OR2W1Q9Y3N9 320 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 DYNC2H1Q8NCM8 4307 aaKnown RBP5.32□□□□□ -1.56
HDAC3-207ENST00000475549 SORL1Q92673 2214 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.31□□□□□ -1.56
HDAC3-207ENST00000475549 METTL21EPA6NDL7 271 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 TMEM235A6NFC5 223 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 HMX3A6NHT5 357 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 NOTOA8MTQ0 251 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 TEX22C9J3V5 150 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 FCGR3BO75015 233 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 TUSC2O75896 110 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 HLA-AP01891 365 aaKnown RBP5.31□□□□□ -1.56
HDAC3-207ENST00000475549 CLEC2LP0C7M8 214 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 OR9G9P0C7N8 305 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 PTHLHP12272 177 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 MYOD1P15172 320 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 DTYMKP23919 212 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 GADD45AP24522 165 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 FGF9P31371 208 aaPredicted RBP5.31□□□□□ -1.56
HDAC3-207ENST00000475549 VMA21Q3ZAQ7 101 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 CD300EQ496F6 205 aaPredicted RBP5.31□□□□□ -1.56
HDAC3-207ENST00000475549 OR2B11Q5JQS5 317 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 ZFAND6Q6FIF0 208 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 ZNF773Q6PK81 442 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 ZNF645Q8N7E2 425 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 OSR1Q8TAX0 266 aaPredicted RBP5.31□□□□□ -1.56
HDAC3-207ENST00000475549 SNAPC3Q92966 411 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 ADTRPQ96IZ2 230 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 PHB2Q99623 299 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 DCSTAMPQ9H295 470 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 RNF167Q9H6Y7 350 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 ZMAT4Q9H898 229 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 ZFAND3Q9H8U3 227 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 ANXA10Q9UJ72 324 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 RAB26Q9ULW5 256 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 RBMX2Q9Y388 322 aaKnown RBP5.31□□□□□ -1.56
HDAC3-207ENST00000475549 RBM7Q9Y580 266 aaKnown RBP5.31□□□□□ -1.56
HDAC3-207ENST00000475549 SELENOKQ9Y6D0 94 aa5.31□□□□□ -1.56
HDAC3-207ENST00000475549 LCE6AA0A183 80 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 CGB1A6NKQ9 187 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 PPP5D1E7EU14 171 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 H0Y980 276 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 OR2J3O76001 311 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 OR2A4O95047 310 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 OR2C1O95371 312 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 AREGP15514 252 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 MYL9P24844 172 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 TALDO1P37837 337 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 ATP5G2Q06055 141 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 CDK10Q15131 360 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 KLK9Q2XQG4 91 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 DEFB114Q30KQ6 69 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 C15orf32Q32M92 178 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 CNIH2Q6PI25 160 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 PUSL1Q8N0Z8 303 aaKnown RBP5.3□□□□□ -1.56
HDAC3-207ENST00000475549 MFSD4AQ8N468 514 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 GVQW1Q8N7I0 195 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 OR5H6Q8NGV6 325 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 ACOT12Q8WYK0 555 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 FANCD2OSQ96PS1 177 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 OR51E2Q9H255 320 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 RETNQ9HD89 108 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 DAPK2Q9UIK4 370 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 KLK9Q9UKQ9 250 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 SPATA2Q9UM82 520 aa5.3□□□□□ -1.56
HDAC3-207ENST00000475549 LYSTQ99698 3801 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 RBMY1BA6NDE4 496 aaKnown RBP5.29□□□□□ -1.56
HDAC3-207ENST00000475549 RBMY1EA6NEQ0 496 aaKnown RBP5.29□□□□□ -1.56
HDAC3-207ENST00000475549 FAM223BA6NKX1 122 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 MRPS14O60783 128 aaKnown RBP5.29□□□□□ -1.56
HDAC3-207ENST00000475549 NDUFB8O95169 186 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 IGHV3-23P01764 117 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 CRYGCP07315 174 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 CD7P09564 240 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 CTXN2P0C2S0 81 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 RBMY1DP0C7P1 496 aaKnown RBP5.29□□□□□ -1.56
HDAC3-207ENST00000475549 ZNF735P0CB33 412 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 SDC2P34741 201 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms