RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 TRBV6-6A0A0A6YYG2 114 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 TMEM14DPA8MWL7 114 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 MPPED1O15442 326 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 IGLV2-23P01705 113 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 CLDN12P56749 244 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 QRFPP83859 136 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 CBX3Q13185 183 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 DEFB125Q8N687 156 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 SNAPC3Q92966 411 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 PTX4Q96A99 478 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 FAM3DQ96BQ1 224 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 DGCR14Q96DF8 476 aaKnown RBP10.6□□□□□ -0.71
CCDC78-209ENST00000474647 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 TMEM68Q96MH6 324 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
CCDC78-209ENST00000474647 OR2D2Q9H210 308 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 SRD5A3Q9H8P0 318 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 Q9N2K0 584 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 C12orf4Q9NQ89 552 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 SLC2A8Q9NY64 477 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 RDH8Q9NYR8 311 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
CCDC78-209ENST00000474647 SHOXO15266 292 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
CCDC78-209ENST00000474647 CD7P09564 240 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 RORCP51449 518 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 SCAND1P57086 179 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 EXOSC2Q13868 293 aaKnown RBP10.59□□□□□ -0.71
CCDC78-209ENST00000474647 TNXAQ16473 311 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 CD300EQ496F6 205 aaPredicted RBP10.59□□□□□ -0.71
CCDC78-209ENST00000474647 IDNKQ5T6J7 187 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 OR2K2Q8NGT1 345 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 KCTD12Q96CX2 325 aaKnown RBP10.59□□□□□ -0.71
CCDC78-209ENST00000474647 CMSS1Q9BQ75 279 aaKnown RBP10.59□□□□□ -0.71
CCDC78-209ENST00000474647 LPAR5Q9H1C0 372 aa10.59□□□□□ -0.71
CCDC78-209ENST00000474647 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 TMEM272A0A1B0GTI8 110 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
CCDC78-209ENST00000474647 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
CCDC78-209ENST00000474647 BET1O15155 118 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 BRI3O95415 125 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 PRH1P02810 166 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 CRYGBP07316 175 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 OR9G9P0C7N8 305 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
CCDC78-209ENST00000474647 ZNF182P17025 639 aaPredicted RBP10.58□□□□□ -0.72
CCDC78-209ENST00000474647 GUCA2BQ16661 112 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 LINC00322Q6ZN03 302 aaPredicted RBP10.58□□□□□ -0.72
CCDC78-209ENST00000474647 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.58□□□□□ -0.72
CCDC78-209ENST00000474647 LGALS14Q8TCE9 139 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 ACOT12Q8WYK0 555 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 ETV7Q9Y603 341 aa10.58□□□□□ -0.72
CCDC78-209ENST00000474647 MSGN1A6NI15 193 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 OR11H12B2RN74 326 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 BMPR1BO00238 502 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 CD3GP09693 182 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 RAB6AP20340 208 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 RHOGP84095 191 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 RTL8BQ17RB0 113 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 CNPY1Q3B7I2 92 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 C2orf76Q3KRA6 126 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 IDO2Q6ZQW0 420 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 LAX1Q8IWV1 398 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 ADAD2Q8NCV1 583 aaKnown RBP10.57□□□□□ -0.72
CCDC78-209ENST00000474647 SRSF12Q8WXF0 261 aaKnown RBP10.57□□□□□ -0.72
CCDC78-209ENST00000474647 AP3S1Q92572 193 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 ARHGAP5-AS1Q96IT6 56 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 DCUN1D5Q9BTE7 237 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 PECRQ9BY49 303 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 AKIP1Q9NQ31 210 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 SDHAF2Q9NX18 166 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 SPATA2Q9UM82 520 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
CCDC78-209ENST00000474647 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 TRDCB7Z8K6 153 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 TUSC2O75896 110 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 EDN2P20800 178 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 MECP2P51608 486 aaKnown RBP10.56□□□□□ -0.72
CCDC78-209ENST00000474647 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
CCDC78-209ENST00000474647 ATP5G2Q06055 141 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 PLA2G7Q13093 441 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 VMA21Q3ZAQ7 101 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 TMEM177Q53S58 311 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 SLIRPQ9GZT3 109 aaKnown RBP10.56□□□□□ -0.72
CCDC78-209ENST00000474647 ZNF230Q9UIE0 474 aaPredicted RBP10.56□□□□□ -0.72
CCDC78-209ENST00000474647 RAB22AQ9UL26 194 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 HSF4Q9ULV5 492 aa10.56□□□□□ -0.72
CCDC78-209ENST00000474647 RBM7Q9Y580 266 aaKnown RBP10.56□□□□□ -0.72
CCDC78-209ENST00000474647 SRRM4A7MD48 611 aaKnown RBP10.55□□□□□ -0.72
CCDC78-209ENST00000474647 ZNF785A8K8V0 405 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 PPP5D1E7EU14 171 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 CRYZL1O95825 349 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 LY6G6CO95867 125 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 TMEM50BP56557 158 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 PMS2P11Q13670 270 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 MRGPRG-AS1Q2M3A8 158 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 IGSF11Q5DX21 431 aa10.55□□□□□ -0.72
CCDC78-209ENST00000474647 OR4A4PQ8NGN8 299 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms