RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 RAB7AP51149 207 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 TAS2R45P59539 299 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 RELQ04864 619 aaPredicted RBP5.13□□□□□ -1.59
HERC4-209ENST00000473533 TMEM30BQ3MIR4 351 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 COL5A1-AS1Q5SY13 56 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 TEX38Q6PEX7 206 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 FAM90A1Q86YD7 464 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 OR5T1Q8NG75 326 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 ADTRPQ96IZ2 230 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 THOC3Q96J01 351 aaKnown RBP5.13□□□□□ -1.59
HERC4-209ENST00000473533 SNHG12Q9BXW3 62 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 PRDM6Q9NQX0 595 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 DEPPQ9NTK1 212 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 POLR3KQ9Y2Y1 108 aaPredicted RBP5.13□□□□□ -1.59
HERC4-209ENST00000473533 GOLT1BQ9Y3E0 138 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 KNTC1P50748 2209 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 TMEM265A0A087WTH1 108 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 ITGB1BP1O14713 200 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 RHBDL1O75783 438 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 OR4A8P0C604 315 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 OR10J4P0C629 311 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 CCL4P13236 92 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 BRS3P32247 399 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 GABRA2P47869 451 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 CYB5R2Q6BCY4 276 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 MDP1Q86V88 176 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 MYPOPQ86VE0 399 aaPredicted RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 CT55Q8WUE5 264 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 SIT1Q9Y3P8 196 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 ASXL3Q9C0F0 2248 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 SAA2-SAA4A0A096LPE2 208 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 C20orf202A1L168 122 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 C15orf62A8K5M9 175 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 EREGO14944 169 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 DLEU1O43261 78 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 GALR2O43603 387 aaPredicted RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 SMPD2O60906 423 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 MT-CO3P00414 261 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 HLA-DQA1P01909 254 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 SNRPCP09234 159 aaKnown RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 ZNF25P17030 456 aaPredicted RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 CD82P27701 267 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 TIGITQ495A1 244 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 TMEM164Q5U3C3 297 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 RASL11AQ6T310 242 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 TEPPQ6URK8 271 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 UBALD2Q8IYN6 164 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 ZNF808Q8N4W9 903 aaPredicted RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 SLC35E1Q96K37 410 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 TTTY12Q9BZ98 90 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 MRPL18Q9H0U6 180 aaKnown RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 ABCA7Q8IZY2 2146 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 FCN1O00602 326 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 IL18BPO95998 194 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 GCHFRP30047 84 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 ADMP35318 185 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 RPL29P47914 159 aaKnown RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 EDDM3BP56851 147 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 UBE2G2P60604 165 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 PEAR1Q5VY43 1037 aaPredicted RBP5.12□□□□□ -1.59
HERC4-209ENST00000473533 UNQ6494/PRO21346Q6UXR6 183 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 C19orf35Q6ZS72 473 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 OR1L6Q8NGR2 347 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 OR4S2Q8NH73 311 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 OR1L1Q8NH94 360 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 S1PR3Q99500 378 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 NCOR1P1Q9H4R4 102 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 OBP2BQ9NPH6 170 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 OSTCQ9NRP0 149 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 CBLN4Q9NTU7 201 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 IL19Q9UHD0 177 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 NCOR1O75376 2440 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 TRIOBPQ9H2D6 2365 aa5.12□□□□□ -1.59
HERC4-209ENST00000473533 CACNA1EQ15878 2313 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 C17orf98A8MV24 154 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 C1QTNF9BB2RNN3 333 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 ARL14EPLP0DKL9 152 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 CD46P15529 392 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 SUMO1P63165 101 aaKnown RBP5.11□□□□□ -1.59
HERC4-209ENST00000473533 HLA-DRB5Q30154 266 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 PQLC2Q6ZP29 291 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 C5orf24Q7Z6I8 188 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 TDHQ8IZJ6 230 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 RAMP3O60896 148 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 LILRA1O75019 489 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 ATP5G3P48201 142 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 GNG4P50150 75 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 Q0VFX4 171 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 CLEC12BQ2HXU8 276 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 ZNF766Q5HY98 468 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 DMRTC2Q8IXT2 367 aaPredicted RBP5.11□□□□□ -1.59
HERC4-209ENST00000473533 FER1L6-AS2Q96M78 137 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 OPN3Q9H1Y3 402 aaPredicted RBP5.11□□□□□ -1.59
HERC4-209ENST00000473533 TECRQ9NZ01 308 aaKnown RBP5.11□□□□□ -1.59
HERC4-209ENST00000473533 CRIM1Q9NZV1 1036 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 UQCR10Q9UDW1 63 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 LOXL2Q9Y4K0 774 aa5.11□□□□□ -1.59
HERC4-209ENST00000473533 CHD9Q3L8U1 2897 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms