RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TMEM69Q5SWH9 247 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 ZNF66Q6ZN08 573 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 OR5AP2Q8NGF4 316 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 OR4S2Q8NH73 311 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 SECTM1Q8WVN6 248 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 PHB2Q99623 299 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 IFT46Q9NQC8 304 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 SCOCQ9UIL1 159 aa17.42■□□□□ 0.38
PTP4A1-203ENST00000473334 PPYP01298 95 aa17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 INSL3P51460 131 aa17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 SLURP1P55000 103 aa17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 TAS2R20P59543 309 aa17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 MFSD4AQ8N468 514 aa17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 SRSF12Q8WXF0 261 aaKnown RBP17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 ACOT12Q8WYK0 555 aa17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 DLX4Q92988 240 aaPredicted RBP17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 TAS2R8Q9NYW2 309 aa17.41■□□□□ 0.38
PTP4A1-203ENST00000473334 BRI3O95415 125 aa17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 HSPB1P04792 205 aaKnown RBP17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 VBP1P61758 197 aa17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 DCTN2Q13561 401 aaKnown RBP17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 MMD2Q8IY49 270 aa17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 ZNF430Q9H8G1 570 aaPredicted RBP17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 CCL28Q9NRJ3 127 aa17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 TNCP24821 2201 aa17.4■□□□□ 0.38
PTP4A1-203ENST00000473334 A0A0G2JLM5 398 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 C13orf42A0A1B0GVH6 325 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 MSGN1A6NI15 193 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 ACTL6BO94805 426 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 SMIM18P0DKX4 95 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 ZBTB34Q8NCN2 500 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 GIMAP1Q8WWP7 306 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 TINAGL1Q9GZM7 467 aaPredicted RBP17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 SLC5A7Q9GZV3 580 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 COA4Q9NYJ1 87 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 ANAPC10Q9UM13 185 aa17.39■□□□□ 0.37
PTP4A1-203ENST00000473334 TNFSF12O43508 249 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 APELAP0DMC3 54 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 ECI1P42126 302 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 KIR2DS2P43631 304 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 BRWD1-AS2P59051 145 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 FXYD4P59646 89 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 VSTM2AQ8TAG5 236 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 GPHA2Q96T91 129 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 COMMD3Q9UBI1 195 aa17.38■□□□□ 0.37
PTP4A1-203ENST00000473334 MPPED1O15442 326 aa17.37■□□□□ 0.37
PTP4A1-203ENST00000473334 EIF4EP06730 217 aaKnown RBP17.37■□□□□ 0.37
PTP4A1-203ENST00000473334 ZNF429Q86V71 674 aa17.37■□□□□ 0.37
PTP4A1-203ENST00000473334 VKORC1L1Q8N0U8 176 aa17.37■□□□□ 0.37
PTP4A1-203ENST00000473334 ADAD2Q8NCV1 583 aaKnown RBP17.37■□□□□ 0.37
PTP4A1-203ENST00000473334 CMTM3Q96MX0 182 aa17.37■□□□□ 0.37
PTP4A1-203ENST00000473334 EHFQ9NZC4 300 aa17.37■□□□□ 0.37
PTP4A1-203ENST00000473334 KBTBD11O94819 623 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 OR2A4O95047 310 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 APOA1P02647 267 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 OR9G9P0C7N8 305 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 PRSS3P35030 304 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 PUSL1Q8N0Z8 303 aaKnown RBP17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 OR2A7Q96R45 310 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 PRR25Q96S07 402 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 SPIN2AQ99865 258 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 SPIN2BQ9BPZ2 258 aa17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 RANGRFQ9HD47 186 aaPredicted RBP17.36■□□□□ 0.37
PTP4A1-203ENST00000473334 SAP30O75446 220 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 HRASP01112 189 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 NAT1P18440 290 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 HERV-K104P61576 105 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 CATR1Q13166 79 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 C10orf55Q5SWW7 151 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 ACSM6Q6P461 480 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 TMEM17Q86X19 198 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 ANKRD13BQ86YJ7 626 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 TMEM167AQ8TBQ9 72 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 USMG5Q96IX5 58 aa17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 ZNF256Q9Y2P7 627 aaPredicted RBP17.35■□□□□ 0.37
PTP4A1-203ENST00000473334 SMIM31A0A1B0GVY4 71 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 GABARAPO95166 117 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 ZP3P21754 424 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 RORCP51449 518 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 TAS2R46P59540 309 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 DEFA5Q01523 94 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 DYRK1AQ13627 763 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 ZNF818PQ6ZRF7 136 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 SPAG16Q8N0X2 631 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 OR5H2Q8NGV7 314 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 BORCS5Q969J3 196 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 B9D2Q9BPU9 175 aa17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 NAA50Q9GZZ1 169 aaKnown RBP17.34■□□□□ 0.37
PTP4A1-203ENST00000473334 DNAH9Q9NYC9 4486 aa17.33■□□□□ 0.37
PTP4A1-203ENST00000473334 COL7A1Q02388 2944 aa17.33■□□□□ 0.37
PTP4A1-203ENST00000473334 ANKRD34BA5PLL1 514 aa17.33■□□□□ 0.36
PTP4A1-203ENST00000473334 RBFOX2O43251 390 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTP4A1-203ENST00000473334 MAS1LP35410 378 aa17.33■□□□□ 0.36
PTP4A1-203ENST00000473334 RFX2P48378 723 aa17.33■□□□□ 0.36
PTP4A1-203ENST00000473334 CD69Q07108 199 aa17.33■□□□□ 0.36
PTP4A1-203ENST00000473334 DHRS11Q6UWP2 260 aa17.33■□□□□ 0.36
PTP4A1-203ENST00000473334 AIFM2Q9BRQ8 373 aa17.33■□□□□ 0.36
PTP4A1-203ENST00000473334 SULT1C2O00338 296 aa17.32■□□□□ 0.36
PTP4A1-203ENST00000473334 PMP2P02689 132 aa17.32■□□□□ 0.36
PTP4A1-203ENST00000473334 RPL27AP46776 148 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms