RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PLCXD2Q0VAA5 305 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 ARFRP1Q13795 201 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 HERPUD1Q15011 391 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 PAFAH1B3Q15102 231 aaKnown RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 RGNQ15493 299 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 OCIAD2Q56VL3 154 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 TMEM236Q5W0B7 351 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 GDPD1Q8N9F7 314 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 OR1L1Q8NH94 360 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 PRSS3P2Q8NHM4 247 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 ZNF501Q96CX3 271 aaPredicted RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 FXYD5Q96DB9 178 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 MALSU1Q96EH3 234 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 GALNT14Q96FL9 552 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 SLC35E1Q96K37 410 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 LXNQ9BS40 222 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 GABARAPL3Q9BY60 117 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 SLC29A3Q9BZD2 475 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 SMIM3Q9BZL3 60 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 OR2D2Q9H210 308 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 SRMSQ9H3Y6 488 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 CEP295Q9C0D2 2601 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 NBEAQ8NFP9 2946 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 LOC400499M0QZD8 3231 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 PATJQ8NI35 1801 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 IGHV4OR15-8A0A075B7B6 117 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 IGHV3-38A0A0C4DH36 116 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 A0A0X1KG70 313 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 WI2-2373I1.2A0A1W2PRP0 233 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 PGPA6NDG6 321 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 LINC01548A6NM66 108 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 SIGLEC16A6NMB1 481 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 KNCNA6PVL3 124 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 K7EQG2 157 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 K7N7A8 449 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 M0R2Z0 102 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 MRASO14807 208 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 PIAS1O75925 651 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 CA2P00918 260 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 CSN2P05814 226 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 C8GP07360 202 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 IGLL1P15814 213 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 TNFRSF1BP20333 461 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 RPS3P23396 243 aaKnown RBP eCLIP4.63□□□□□ -1.67
RTF1-203ENST00000473214 AQP1P29972 269 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 P2RX1P51575 399 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 NCBP2P52298 156 aaKnown RBP eCLIP4.63□□□□□ -1.67
RTF1-203ENST00000473214 TAS2R30P59541 319 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 DEFA3P59666 94 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 TNFAIP6P98066 277 aaPredicted RBP4.63□□□□□ -1.67
RTF1-203ENST00000473214 FABP5Q01469 135 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 HIST1H1AQ02539 215 aaPredicted RBP4.63□□□□□ -1.67
RTF1-203ENST00000473214 ZNF763Q0D2J5 394 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 HTR4Q13639 388 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 FZD2Q14332 565 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 LPAL2Q16609 132 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 Q499Y3 187 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 C1orf100Q5SVJ3 147 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 LCN8Q6JVE9 175 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 TEX43Q6ZNM6 134 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 PDZD9Q8IXQ8 264 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 IFT20Q8IY31 132 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 KLK6Q92876 244 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 GPR146Q96CH1 333 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 PLEKHB2Q96CS7 222 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 TMEM101Q96IK0 257 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 LINC01587Q99440 93 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 LINC00470Q9BZP3 86 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 CHST6Q9GZX3 395 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 OR52D1Q9H346 318 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 DHCR7Q9UBM7 475 aaKnown RBP4.63□□□□□ -1.67
RTF1-203ENST00000473214 ERG28Q9UKR5 140 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 HES2Q9Y543 173 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 INSIG2Q9Y5U4 225 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 TTC3P53804 2025 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 RALGAPA1Q6GYQ0 2036 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 AKAP13Q12802 2813 aa4.63□□□□□ -1.67
RTF1-203ENST00000473214 MYH7BA7E2Y1 1941 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 WDFY3Q8IZQ1 3526 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 YLPM1P49750 1951 aaKnown RBP4.62□□□□□ -1.67
RTF1-203ENST00000473214 hCG_1818297A0A087WSY0 165 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 TRAV8-3A0A0A6YYJ7 113 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 CIB4A0PJX0 185 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 A8MT66 165 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
RTF1-203ENST00000473214 SS18L1O75177 396 aaPredicted RBP4.62□□□□□ -1.67
RTF1-203ENST00000473214 TRBV12-3P01733 135 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 FOLR2P14207 255 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 MUC1P15941 1255 aaPredicted RBP4.62□□□□□ -1.67
RTF1-203ENST00000473214 IGHV1-2P23083 117 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 GADD45AP24522 165 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 CNTFRP26992 372 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 SRPXP78539 464 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 TMEM267Q0VDI3 215 aaPredicted RBP4.62□□□□□ -1.67
RTF1-203ENST00000473214 DAZ2Q13117 558 aaKnown RBP4.62□□□□□ -1.67
RTF1-203ENST00000473214 SSX1Q16384 188 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 WDR38Q5JTN6 314 aa4.62□□□□□ -1.67
RTF1-203ENST00000473214 IBA57Q5T440 356 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms